Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0594 ATGGCATCTCGGATGAAAGAAGATGAGAAAATTGAAAGAGAAATTCGAAGTCTCTCGAAACTTCCTGAAAATCGGAGATGTATCAACTGCAATAGTTTGGGACCACAATATGTCTGCACAACCTTTTGGACTTTCGTCTGCACAAACTGCAGTGGAATTCAACGAGAGTTTAACCACAGAGTAAAATCAGTATCAATGGCTAAATTTACCTCAGAAGAAGTCCCTGCTCTTCAGGCAGGCGGCAATGAAAAAGCAAAGCAGATTTATTTTAAAGACTGGGATCCTCATCATCAGTCTTATCCCGATACCAATAACATTCCAAGACTTCGCGATTTCATCAAACAAGTCTATGTGGATAGAAAATTCACCGGTGAAAGGACCCGAAATAATCTTCCCAGACTTAGATTGAATGACAAGGAGGAGTCCCACGACGGCAGGAAGCTTAGTTTTTCCCGAAGCGAACGTTATGAAGAGAGAAATGATATGCGTAGTCCTAGTTCACGAAACGAGGACAGAAGTGTCAAGTATTATTATGATGACAGAAGAAGTCCCAGATATGCCTCGAGGAATGGGAACCACAGAAGAAATCCTGTAAAAATTGAGGTTGTGGATGATAGAATCCGAGACGATAAATCTAGAACTCGCAGGTTTTCAAGCATAGAGTTAAAGGAAACAGCGGTTTCATCTGATGTACAAAAGAATGAGGACAGAGGGAAGAAGGGTGCACCTGCCAGTGAAGAGGAACCCGTTGAGGAGAATCCAGCTGAACAAAAAAACCCAGAAACCCAGATTTTGAGTGTCGTCACATCACAGGTTTCTGATACTGCAACTGCACCGGAAGCTCATTGTACATCTCAATCAAATGATGGAAGTGACTGGGCACCGTTTGAAATTTCCACAGCAAAGGAGGCTTCTCAAACCCCAAACACAAATACTTCGAAGTGTTCTACAACAGAGACAACAACTAAAACTTTAGATGCTATAGAATTTTTACTCTCTGAATTGTCTGGTCCTTTGTATGCAGCAGCTAGTAGTATGTCTGATGTTCGCACTGCTGATAATGATACTTCAACTGCAAGAGTAGAAGAAATCTCCGTGGATGTGGATTTAGCACCGCCGACCCCAGCAGGCCAGATAATTCCATTTCCCAACAACGTTGGTGCTTTCTCAGTTACATCAACCAGTGATTCTGATCTGACGCAAACCTCAACAGCTTGTAGCTCAGTGACACAATCAATGAGTCCATCAGTCAGAGATGTCCCTTCGCCTAATCAGCCAGAAGTTGCTCCTAAAGCGCTAGACCTTTCAAACTCTCTTATGGAACTATCTCTTCAAGCCGCATCAGAACCTACTCAAGACACCAGATCTGATGTCAGATCCCAACCTAGGATAACACAAACCAAGTCTATGGGAAGAAAGGAACTTCCAGAGAATCTCTTTACAACAAGCTACTTGCCAGGCCATGCACCGCAAGCAGGCTGGCAGGATTTTCAACCTCATTATATGGGATACGGCGGCTTGCAGTATTATTCTAATGCAGCACCAATCTCGGCATTTCCCCCTGCAGCAAAGTCCACAAACCCATTTGATGTAACTGAGGGGAGACTTCAAGTCCATGCTTCTCCATTTCATACTATGGCAAATTTGCATGGTGCACAAACTGCTATGTCAACTGGAGCAGGATTAGGGCGTGCTTCAAGCCTTGGGGCTTTAGGCTCGATGGTGCCTCAATCCCCAAATTATGCATCTTCAATGCCTCTGCAATCTCCCTTTACTCCTGGATTTCCTTCTGGTGCATACTTTGAGCAAGTTAATAATAATATGCAAGCTCCCAGACCTCGAAGAGCTGGCAGCTTCAATGGCGAAACAAACTTCCAACATTCAGCTGGGGGATATGCGGCTCCCGGCTACCCTCTAAATTCTTTTCCCAAGACAGGAGGAAATCCATTTGGATAG 1956 0.4407 MASRMKEDEKIEREIRSLSKLPENRRCINCNSLGPQYVCTTFWTFVCTNCSGIQREFNHRVKSVSMAKFTSEEVPALQAGGNEKAKQIYFKDWDPHHQSYPDTNNIPRLRDFIKQVYVDRKFTGERTRNNLPRLRLNDKEESHDGRKLSFSRSERYEERNDMRSPSSRNEDRSVKYYYDDRRSPRYASRNGNHRRNPVKIEVVDDRIRDDKSRTRRFSSIELKETAVSSDVQKNEDRGKKGAPASEEEPVEENPAEQKNPETQILSVVTSQVSDTATAPEAHCTSQSNDGSDWAPFEISTAKEASQTPNTNTSKCSTTETTTKTLDAIEFLLSELSGPLYAAASSMSDVRTADNDTSTARVEEISVDVDLAPPTPAGQIIPFPNNVGAFSVTSTSDSDLTQTSTACSSVTQSMSPSVRDVPSPNQPEVAPKALDLSNSLMELSLQAASEPTQDTRSDVRSQPRITQTKSMGRKELPENLFTTSYLPGHAPQAGWQDFQPHYMGYGGLQYYSNAAPISAFPPAAKSTNPFDVTEGRLQVHASPFHTMANLHGAQTAMSTGAGLGRASSLGALGSMVPQSPNYASSMPLQSPFTPGFPSGAYFEQVNNNMQAPRPRRAGSFNGETNFQHSAGGYAAPGYPLNSFPKTGGNPFG 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0594 651 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lele26g0594 651 MobiDBLite consensus disorder prediction 393 421 - -
Lele26g0594 651 PANTHER ARFGAP/RECO-RELATED 241 651 IPR044820 GO:0005096
Lele26g0594 651 MobiDBLite consensus disorder prediction 445 468 - -
Lele26g0594 651 MobiDBLite consensus disorder prediction 256 294 - -
Lele26g0594 651 CDD ArfGap_AGFG 12 122 - -
Lele26g0594 651 MobiDBLite consensus disorder prediction 133 197 - -
Lele26g0594 651 ProSiteProfiles ARF GTPase-activating proteins domain profile. 9 130 IPR001164 GO:0005096
Lele26g0594 651 MobiDBLite consensus disorder prediction 393 430 - -
Lele26g0594 651 MobiDBLite consensus disorder prediction 133 187 - -
Lele26g0594 651 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Lele26g0594 651 MobiDBLite consensus disorder prediction 300 319 - -
Lele26g0594 651 MobiDBLite consensus disorder prediction 225 294 - -
Lele26g0594 651 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Lele26g0594 651 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lele26g0594 651 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lele26g0594 651 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lele26g0594 651 MobiDBLite consensus disorder prediction 228 255 - -
Lele26g0594 651 Gene3D Arf GTPase activating protein 1 132 IPR038508 -
Lele26g0594 651 SUPERFAMILY ArfGap/RecO-like zinc finger 12 123 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0594 Lele-ChrLele26 3781330 3785913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0594 12 122 C2H2 Transcription Factor Family AT4G05330 31.897 4.07e-11 63.2