Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0587 ATGCTCACCATCAAGATTTATGTATTCAAAGGTTTAATCCTTTCTCAGTTGACCATACAAACAGTATTTATCGATGCGATAATGTTGAGGAAGAGAACCAGGTCACTCCAGAAGGATCAACACCTCATGGGTCATGTAGCAAACCCAGATGCTAATTCGGACTACTATTCTCAGTCTCAATCTCTGGGGAGAAACATCAAAAGCAATTCGATTTTCAATGTTCCTCGTGTGTTTGTAGGTCTGGGTCCTAAGGGTTTACTAGATTCTGATTCAGTTAGGAGCCCAACATCTCCACTTGATGTTAGGGTTCTGTCAAACTTAGGAAACGCACTTAGAGCCCCAAGATCATCTCCCCATAAGGGGAATCATAGGAGCTGGGAATGCAGCAAAGTAGGCCTAAGCATAATAGATTCTTTGGAAGATTGTCCTAAATTTTCTCGGAAAATTCTCCGACCATCAGAGAGTAAGAATCTTAGTCTCAGTCCAAGAATGAGGGTGAAAATCCCAAATTGTCAAGCCTATACCGATTCTTTTGAGGCATCTAAATCCTTACCCAAGGATTTTTGTAAGCATCCCTATAGCAAGAGTGGGTCTATTTCTGGCAAGGGTGAATCAAAAGTTCTTTTTGAAATTGGAGAAACCCACCCAGAGATTGAGCCATTTGGGAAAAGTATGTCTAGTTCTATGGACTCCTGCAGTCCGTTGAAAATCCTTTCTGGTTTAACTCATTCGAACATTGATTCAATCTCTGAGATTACTATGAAAAATATGGTCCACCAAGTGCGCTCTCCTCCTCATTTTAACGGAGGAAGCCAGAACTCAAGCATCTTATCTCGTACAGAATTTAATTCAAAACTTTCATCCATATGCACATCAAATGAATTTGTTGGGTCTTTATCTGCTGATGAGATTGAACTTTCTGAGGACTACACATGTGTAATTTCCCGTGGTCCTAATCCAAAAACTACTCATATTTTTGGAGATTGCATCCTGGAAACTCATTCTAATGGTTTTGGAAATCGTAGTAAGAATCAAGAGGGGGATAATGGAGTGCTGCCAAATGTGGCTAAAAGCTTACAAGCTCCAAACCAGTATCCCTCTAGTGACTTCTTGAGTTTCTGTTACCATTGTGACAAGAAACTGGAAGAGGGCAAAGATATTTATATATATAGAGGTGAACAAGCATTTTGCAGTTTAAGTTGCCGTGCTCTGGAGATCATGATTGACGAGGAACTTGAGAAGAAATCAAATCCATCTGGAAATTCTTCTCCAAAACCAGAAAATAGTGAGGAACTTCTTCAAACTGGCATTTTCACAGCCACCTAG 1326 0.402 MLTIKIYVFKGLILSQLTIQTVFIDAIMLRKRTRSLQKDQHLMGHVANPDANSDYYSQSQSLGRNIKSNSIFNVPRVFVGLGPKGLLDSDSVRSPTSPLDVRVLSNLGNALRAPRSSPHKGNHRSWECSKVGLSIIDSLEDCPKFSRKILRPSESKNLSLSPRMRVKIPNCQAYTDSFEASKSLPKDFCKHPYSKSGSISGKGESKVLFEIGETHPEIEPFGKSMSSSMDSCSPLKILSGLTHSNIDSISEITMKNMVHQVRSPPHFNGGSQNSSILSRTEFNSKLSSICTSNEFVGSLSADEIELSEDYTCVISRGPNPKTTHIFGDCILETHSNGFGNRSKNQEGDNGVLPNVAKSLQAPNQYPSSDFLSFCYHCDKKLEEGKDIYIYRGEQAFCSLSCRALEIMIDEELEKKSNPSGNSSPKPENSEELLQTGIFTAT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0587 441 PANTHER FCS-LIKE ZINC FINGER 11 28 440 IPR044585 -
Lele26g0587 441 MobiDBLite consensus disorder prediction 413 441 - -
Lele26g0587 441 ProSiteProfiles Zinc finger FLZ-type profile. 369 413 IPR007650 -
Lele26g0587 441 MobiDBLite consensus disorder prediction 417 441 - -
Lele26g0587 441 Pfam zinc-finger of the FCS-type, C2-C2 363 411 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0587 Lele-ChrLele26 3765049 3766549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0587 26 3765049 3766549 Lele01g0594 01 3500684 3502659 CCT
Lele26g0587 26 3765049 3766549 Lele02g0583 02 3494369 3495562 CCT
Lele26g0587 26 3765049 3766549 Lele03g0598 03 3523577 3524757 CCT
Lele26g0587 26 3765049 3766549 Lele04g0602 04 3643851 3645039 CCT
Lele26g0587 26 3765049 3766549 Lele27g1508 27 21052461 21059285 hybridization
Lele26g0587 26 3765049 3766549 Lele28g0575 28 3693200 3694555 hybridization