Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0575 ATGGACCGTATGGCCGACCAGACCTTTCTACGTAATCGCGGAACACCGAGAGGAGAGGCAAAGGGACTGCCATTGTTTGGTTCAGGAATGATCTTAGAGTATTGGATAATGAAGCTCTCTACAACGCCTGGCTTGTGTCCGAGTCTGTATTGCCCGTCTACTGTATTGATCCTCGACTATTCGGGACCACCTATTATTTTGGATTTCCTAAAACTGGGGCATTACGAGCACATTCTCATTGAATGCCTAGCTGACTTGAGAAAGAATTTGATGAAATGGGGACTGAATCTGCTCATTCAACATGGGAAGCCTGAGGATATTTATCCATCTCTTGCAAAAGCTTTTGGAGCTCACACAGTTGAGTATATGCCCAGAAAGAAACTTGCAGTGAGGAGAAGATTGGTCAACAAGGGTCTGCATCAAGTTGTGATACTGCCATTTTCTGGGGAATCCACAGGTGCTACAACTTCAAACAAACCCAAGCTAAAACTTATTTGGGGCGCCACCTTGTACAATATTGATGTCCTCCCTTTTGATGCCACTAATTTACCAGGGGTGTATACTCAATTTCGTAAGACTGTTGAAGCCAAATGCACTGTGCGCGCATGCATAAAACTTCCAAAATCTCTTGGGCCACCTCCTCAAGTTGGGGATTGGGGATGCCTACCTTCATTGGAGAAGCTGAGATTTTGTTCATCAAATGTAGGTAAGCACGGGAATGAAGATTTACTGAAGGTACATAAAGAGACCAGAAATGGGATGTTAGGCCCTGATTACTCAACTAAATTTTCACCATGGCTTGCCTCCGGGAGCTTGTCTCCTCGTTTCATACATGAAGAGGTTAAGAGGGTTTTGTTTGAACTGATATGGAGGGATTACTTCAGGTTCCCTTCAATCAATTGTGGAAATTCTATATTCCATGTAGGTATGATTGAGATTGTATGTTCATTTCTTGTTCGTGATATGGGCATAGATTGGTTCATGGGAGCAGAATGGTTTGAGACATGCCATCTGGATTATGACCCATGTTCCAATTATGGGAATTGGACTTATGGATCAGATGCAGTATTCCTTTTTCTTAGCTTTATAGCATATGAAAATGATAATCTCCTACTCATTCTAAAATCTTCTTGTTCAGTAGTTGGGAATGATCCCAGAGAAGACCGTTATTTCAGCATACCTAAACAAGCACAGACATATGACCCAGAAGGCAACTTGTGCCCCTCAAGTTTGGGACTTCAGGAAGATACCATAAGGAGGACAAACCCCTGGGTGCAACCAGACCTAATCATAGAGGAAGAGAAGCTAGAAGTAACCGGAGACAATTTGGATAATAAAGAAAGAGTAAAATTCTGGAAGAGATCGATCCCAGCATGTGGATTTACGGGTGAGGACACCCCCGAAAAGGGAAGCCCCAATTTCGAAGCCTTTTGCTTCCTACTCCTCATTCAATTTACATACATTCGCTCCATCGAAGGGCGTTTCGTTTGCCTTCACGAACTTCCTAACCTTTCCATCTCTCTGCCTGACGTCTATCTGAAGGAAGAGATCGATCCCAGCATCTCGGATCGAATTTCTTCCTCGAGGGTTCTTCATTTCTTCATTCTTTCTCAGCATGCTTTCTCAACATATCCATCTATGTCGTTTGGAGGGGGCGGGGATTCCTTTGTTTACGCTGCTTTCTTGAAATCACATTTTTATCTTTCAGAGCAGTCGGATGAAGGGGTGGAACTTGAAATAAAAGCAATGGCTGATGACAAAGGATTTGGAGAAGTTGAAAGCAAACAAACAAGTCCTACTGCTGCTGCAAGTAGAAAGAAGCGCCAGGGATTTATTTCCCGACTTTGGAATGGAATATTTAGATTACATGGAGATGATTTCGAAAAGAGACTGCAATACATTTCTAAAGAAGAAGCTGCTGTTTTGACTAGAATCAACAGGAGATCTCAATCTTGGAGGCAAACAACTCGGCATCTTATTGTGTTTTCGATTATATTTGAGGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAGTGGATATGAATTGGAAGATGAGGGCATTCCGGGTCTTGCCAATGTTTCTTTTGCCCGCCTTGTCATCTGCTGCTTATTCAGCTGTTGTCAGCTTTACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAGCTCAAAGAGAAAACAAATTATTACACTACTCAACAGCTCATTCAGAGATATGATCCAGACCCGGCAGCAAAGGCAGCGGCAGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGCTTGAAAGTTTATCTAGGGGATGAATCAAACCACAGTGCTTCAACAGGGATGAGCAACGATGTTGAACTTGTACAAGCTAGTGGACTCCGAAATCGAAAACAAATGCAGTCTAGATATACTACTCCAGGGACAGCTACACCAAAGCTTCCTGTTCCTGAGCAACAAATTGTGGGTTCTAGTGAAACTGAAGAAGGTCCCACTTCTGAGCATAACCAGCTTGTAGTTGTAGAGCACCACCAACCTCAGAGTTCATCCACAAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTCGTGGGTGAGGATCCAACGCAGTCTTATGCACTTATATGTGGTAACTGCCATATGCATAACGGTCTTGCTCGGAAAGAGGATTTCCCTTTCATCACTTACTATTGCCCGCACTGTCAAGCGTTGAACAAGCCTAGGAATTCAGACGAGGGTGTCTCTACTTTGAATTCCCCAAAAATGGAGCTGCGAAAAACAGACGTTGTTGACGCAGTTAAAAATACCTTGGATTCTGCTGGCGACATCTTAATCACAAACAATAGTCCCGCTGATTCTCGTGCCGAGATCGAGGAAATATCTGAAAGGCCAGATTTGGGGCAGAAAGCTAGCTAA 2955 0.4342 MDRMADQTFLRNRGTPRGEAKGLPLFGSGMILEYWIMKLSTTPGLCPSLYCPSTVLILDYSGPPIILDFLKLGHYEHILIECLADLRKNLMKWGLNLLIQHGKPEDIYPSLAKAFGAHTVEYMPRKKLAVRRRLVNKGLHQVVILPFSGESTGATTSNKPKLKLIWGATLYNIDVLPFDATNLPGVYTQFRKTVEAKCTVRACIKLPKSLGPPPQVGDWGCLPSLEKLRFCSSNVGKHGNEDLLKVHKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRVLFELIWRDYFRFPSINCGNSIFHVGMIEIVCSFLVRDMGIDWFMGAEWFETCHLDYDPCSNYGNWTYGSDAVFLFLSFIAYENDNLLLILKSSCSVVGNDPREDRYFSIPKQAQTYDPEGNLCPSSLGLQEDTIRRTNPWVQPDLIIEEEKLEVTGDNLDNKERVKFWKRSIPACGFTGEDTPEKGSPNFEAFCFLLLIQFTYIRSIEGRFVCLHELPNLSISLPDVYLKEEIDPSISDRISSSRVLHFFILSQHAFSTYPSMSFGGGGDSFVYAAFLKSHFYLSEQSDEGVELEIKAMADDKGFGEVESKQTSPTAAASRKKRQGFISRLWNGIFRLHGDDFEKRLQYISKEEAAVLTRINRRSQSWRQTTRHLIVFSIIFEVIAVGYAIMTTRSVDMNWKMRAFRVLPMFLLPALSSAAYSAVVSFTRMCDRRDQKILERLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGDESNHSASTGMSNDVELVQASGLRNRKQMQSRYTTPGTATPKLPVPEQQIVGSSETEEGPTSEHNQLVVVEHHQPQSSSTNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCQALNKPRNSDEGVSTLNSPKMELRKTDVVDAVKNTLDSAGDILITNNSPADSRAEIEEISERPDLGQKAS 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0575 984 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 605 955 IPR040115 GO:0071786
Lele26g0575 984 MobiDBLite consensus disorder prediction 968 984 - -
Lele26g0575 984 MobiDBLite consensus disorder prediction 806 846 - -
Lele26g0575 984 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 79 220 IPR036155 -
Lele26g0575 984 Pfam DNA photolyase 77 202 IPR006050 -
Lele26g0575 984 Gene3D HUPs 60 167 IPR014729 -
Lele26g0575 984 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 306 425 - -
Lele26g0575 984 Coils Coil 721 744 - -
Lele26g0575 984 Pfam FAD binding domain of DNA photolyase 310 405 IPR005101 -
Lele26g0575 984 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 243 367 IPR036134 -
Lele26g0575 984 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 868 918 IPR019273 -
Lele26g0575 984 MobiDBLite consensus disorder prediction 958 984 - -
Lele26g0575 984 Gene3D - 168 239 - -
Lele26g0575 984 Gene3D - 240 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0575 Lele-ChrLele26 3656636 3665724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0575 26 3656636 3665724 Lele01g0588 01 3458821 3461920 CCT
Lele26g0575 26 3656636 3665724 Lele02g0580 02 3473484 3476685 CCT
Lele26g0575 26 3656636 3665724 Lele03g0591 03 3485374 3489353 CCT
Lele26g0575 26 3656636 3665724 Lele04g0596 04 3617856 3621033 CCT
Lele26g0575 26 3656636 3665724 Lele27g1516 27 21112488 21116978 hybridization
Lele26g0575 26 3656636 3665724 Lele28g0564 28 3596664 3599818 hybridization