Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0559 ATGGCTGATTCAGTGCATGCTAGCAGCGATGATAAAATTCAGAATTTGATTTCTGCTAAGAAGTCATTGAAGCTTAGCCTTGAGAAGTCAAAGTCCCTAGGGTTAGCTTTGGAGAAGGCTGGGCCTAGATTGGAGGAGATTAGCCAGAGATTGCCTTCCCTTGAATCTGCAGTTCGCCCCATTCGTGCCGACAAGGACGCCCTTGCGGCTGTTGGTGGACACATTAATCGAGCAGTTGGCCCCGCAGCTGCCGTGCTCAAGGTTTTTGACGCTGTTCATGGCCTCGAAAAGTCACTCTTATCTGATACGCGTAATGATCTCCCAGGTTATTTGTCAGTGTTGAAGCGTCTCGAAGAGGCACTGAGGTTCTTGGCAGATAACTGTGGATTGGCAATTCAGTGGTTGGAGGATATAGTGGAGTACTTGGAAGATAATACTGTTGCTGATGAAAGGTATCTGTCAAATTTGAAGAAATCACTTCAAAATCTTCGTGAATTGCAAAATGACGAGGGAAAGGCTCGACTGGATGGTGGGCTTTTAGAAGCAGCATTGCAAAAACTGGAAAATGAATTCCGGCAGCTATTGACTGAAAACAGTGTTCCACTCCCAATGTCACCATCGCCTACGCTTGCTGATCAGGCATGCATTGCTCCTTCACCTTTACCAGTATCTATTATTCACAAGTTGCAAGCAATTCTTGGCAGATTGATTGCTAACAATAGACTTGACAAGTGCATATCAATTTATGTTCAAGTCCGTAGTTCAAATGTCAGAGCAAGCTTGCAGGCTCTCAATCTGGATTACCTTGAGATCTCAATAGCTGAATTCAATGATGTGCAGAGCATCGAGGGATATATAGCCCAATGGGGAAAGCATTTAGAGTTTGCAGTGAAGCATTTGTTTGAAGCTGAGTATAAACTTTGTAACGATGTCTTTGAGAGGATTGGATTGGATGTTTGGACGGGCTGCTTTTCAAAGATAGCTGCACAGGCCGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGATCCCATCAAACTTTTAAAGTTATTGGACATATTTGCATCTCTGAACAAACTGAGATTGGATTTCAACCGCCTTTTTGGTGGAGCAGCATGTGCTGAAATTCAGAACTTGACTAGGGATCTAATCAAGAGAGTGATTGATGGGGCAGCAGAGATTTTCTGGGAACTCCTGGTCCAGGTAGAGTTACAGAGACAGAATCCCCCTCCTCTTGATGGCAATGTCCCAAGATTGGTGAGTTTCATTACTGATTATTGTAACAAACTCCTAGGGGATGACTATAAGCCAATATTGACCCAAGTCCTTGTCATACACCGGAGTTGGAAACGCCAGAGCTTTCAGGAGAGACTCCTAGTGAATGAGGTTTTAAACATTCTAAAAGCCGTAGAATTGAATTTGGAGACATGGATCAAGGCTTATGATGATCCTATGCTATCGAACTTCTTTGCTATGAATAATCACTGGCATCTTTACAAGCACTTGAAAGGAACAAAGCTGGGGGATCTCTTGGCGGATTCTTGGTTGAAAGAACATGAACAGTACAAGGACTATTACTCCACAATTTTCTTGAGGGATAGTTGGGGAAAGCTTCCTGGTCATTTGAGCAGGGAAGGGCTGATTCTGTTCTCAGGAGGCCGTGCTACTGCTCGTGATCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTATACAAAGCAGTCGAGCTGGGTTATCCCAGAACGAGATCTGAGAGAGAAAACAACCCACCTTATAGTGCAAGCTGTGGTTCCTGTTTACCGGAGTTACATGCAGAATTATGGACCCTTGGTTGAGCAAGATGCCAGCTCCTCAAAATATGCTAAATACAGTGTGCAGAAGCTGGAGGGAATGCTTTCGTCTCTTTATCAGCCGAAGCCTGTGAGACACGCCAGTTTGAAAGGTCGGCAATTCAGTGAGAAATTTGGCAATCAAATGGCGGATCTTCGTCGCACGGCCTCTGCAGTTGTGTAA 2046 0.4399 MADSVHASSDDKIQNLISAKKSLKLSLEKSKSLGLALEKAGPRLEEISQRLPSLESAVRPIRADKDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDTRNDLPGYLSVLKRLEEALRFLADNCGLAIQWLEDIVEYLEDNTVADERYLSNLKKSLQNLRELQNDEGKARLDGGLLEAALQKLENEFRQLLTENSVPLPMSPSPTLADQACIAPSPLPVSIIHKLQAILGRLIANNRLDKCISIYVQVRSSNVRASLQALNLDYLEISIAEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWTGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLVIHRSWKRQSFQERLLVNEVLNILKAVELNLETWIKAYDDPMLSNFFAMNNHWHLYKHLKGTKLGDLLADSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWVIPERDLREKTTHLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYSVQKLEGMLSSLYQPKPVRHASLKGRQFSEKFGNQMADLRRTASAVV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0559 681 Gene3D Exocyst complex component Exo70 136 655 - -
Lele26g0559 681 Pfam Exo70 exocyst complex subunit 288 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lele26g0559 681 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Lele26g0559 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 118 643 IPR004140 GO:0000145|GO:0006887
Lele26g0559 681 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0559 Lele-ChrLele26 3557926 3559971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0559 1 681 EXO70 exocyst subunit family AT4G31540 75.762 0.0 1075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0559 26 3557926 3559971 Lele27g1534 27 21240741 21242786 hybridization
Lele26g0559 26 3557926 3559971 Lele28g0549 28 3496419 3498464 hybridization