Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0546 ATGGCTCACCACAGAGCCTACCATCATGGGCTTCTCGTCTTGCTCATCAACTTCTTCGTCCTAGTCGTCTGCTTTGTGCCGTGTTTGGGTGATGACCCTCAGGTTCTGATCAAGTTCAAGAGCTTCTTGTCCAATGCTGATGCCTTGTCCAACTGGAACGAATCTGTAAACATCTGTAACTGGAAAGGTGTCAAATGTCGCAAAGGAGGGTTTCACTTGATACTCGACAACATGGGACTGAGTGGCACTATTGACATTGATACCTTGTTGGAATTATCCAATTTGCAGTCCTTTAGCGCCAAAAACAACAGTTTTGAAGGTAACATGCCTGGTTTTAACAGGATTGGGAGGTTGAAGGGGCTGTATTTGTCCCATAACAACTTCTCTGGAGACATTCCTGATAATGCTTTTGACGGTTTGAAATATCTGAGCAAGGTATACTTGGCGGAAAATGAGTTCACAGGTCGTATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATTCGAATCGTTTTGAGGGAAACATACCAGAGTTTCGAACCAAAAATAAGTTCAGAGTTTTCAATGTATCCGACAACCTGCTTCAAGGTGAAATACCAGGAAATACAAACAACGGCGATCCCAGCTCATATAATGACACACAGAGATTTGAACTGCTAGATCTTCTCGGAGCTTCGGCAGAAATTCTGGGCAGTGGCAGTTTTGGATCCACTTATAAAGCTATTGTTCTGAACGGACCCGCCGTGGTGGTGAAGAGATTTAAACACATGAACAGTCTCGGGAAAGAAGAGTTCTTTGAGCACATGACAAGGCTCGGAAGCTTGAACCACCCTAACCTTCTTCCTCTTGTTGCTTTCTACTACAGAAAAGAAGAGAAGCTTCTGGTTTATGACTGGGCTGAAAATGGCAGCTTGGCCAGTCATCTCCATGGTAGGCGTGGTTCTGGGTTAGATTGGCCAACCCGGTTGAAGATCATAAAAGGAGTAGCGAGAGGATTAACTTATCTCTACAGAGAATGCCCAGAACAAAAGCTTCCACATGGACATCTGAAATCCTCGAATGTTCTGCTAGATCAGTCAATGGAGCCTCGTCTGACAGAGTACGGGCTCGTGCCAGTGATGAACAAGAGCCATGCTCAACAGTTCATGGCGGCATACAAGGCCCCGGAGGTGAACCAATCCGACGGACCCAACCAGAAGACCGACGTGTGGTGTTTGGGGATTCTGATTCTGGAACTTCTGACAGGGAAATTCCCGGCAAATTACCTACGACATGGGAAAGGAGCGAACTCGGACCTGGCCACGTGGGTGGATTCGGTGGTGAGAGAAGAGTGGACAGGGGAGGTGTTTGATAAGGATATTCTAGGTACGAGGAATGGAGAGGGAGAGATGCTGAAATTGTTGAAGATAGGAATGTATTGTTGTGAATGGGACGTGGAGAGTCGGTGGGATTGGAAGGAGACGATGGGGAAGATTGAGGAATTGAAGGAGAAGGATAGTGAAGAAGATTTCTCTTCTTTTAATAACAGTGAAGCCGATCTCTCCTCCTACTAG 1569 0.4608 MAHHRAYHHGLLVLLINFFVLVVCFVPCLGDDPQVLIKFKSFLSNADALSNWNESVNICNWKGVKCRKGGFHLILDNMGLSGTIDIDTLLELSNLQSFSAKNNSFEGNMPGFNRIGRLKGLYLSHNNFSGDIPDNAFDGLKYLSKVYLAENEFTGRIPSSLAELPNLLDLDLHSNRFEGNIPEFRTKNKFRVFNVSDNLLQGEIPGNTNNGDPSSYNDTQRFELLDLLGASAEILGSGSFGSTYKAIVLNGPAVVVKRFKHMNSLGKEEFFEHMTRLGSLNHPNLLPLVAFYYRKEEKLLVYDWAENGSLASHLHGRRGSGLDWPTRLKIIKGVARGLTYLYRECPEQKLPHGHLKSSNVLLDQSMEPRLTEYGLVPVMNKSHAQQFMAAYKAPEVNQSDGPNQKTDVWCLGILILELLTGKFPANYLRHGKGANSDLATWVDSVVREEWTGEVFDKDILGTRNGEGEMLKLLKIGMYCCEWDVESRWDWKETMGKIEELKEKDSEEDFSSFNNSEADLSSY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0546 522 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 220 506 - -
Lele26g0546 522 ProSiteProfiles Protein kinase domain profile. 229 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0546 522 SUPERFAMILY L domain-like 52 242 - -
Lele26g0546 522 Gene3D Ribonuclease Inhibitor 139 219 IPR032675 -
Lele26g0546 522 Gene3D Ribonuclease Inhibitor 31 138 IPR032675 -
Lele26g0546 522 FunFam Pollen receptor-like kinase 1 305 511 - -
Lele26g0546 522 MobiDBLite consensus disorder prediction 502 522 - -
Lele26g0546 522 SUPERFAMILY Protein kinase-like (PK-like) 233 497 IPR011009 -
Lele26g0546 522 Gene3D Transferase(Phosphotransferase) domain 1 305 520 - -
Lele26g0546 522 Gene3D Phosphorylase Kinase; domain 1 220 304 - -
Lele26g0546 522 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Lele26g0546 522 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Lele26g0546 522 Pfam Protein kinase domain 233 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0546 522 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0546 Lele-ChrLele26 3469826 3474731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0546 217 500 Receptor kinase-like Gene Family AT4G31250 62.021 2.91e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele26g0546 Pkinase 2.6e-31 CL0016