Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0536 ATGCAACTTGATGTATCTCTCAAGTCAGAATTTCTTCTGGAAGTGAATGAAAGATCAAGAAGTAATTATAAAGCTTCAAAACCCCATTTGAGCAAGAGTTTCCACTCCATGCAAAAGAAAGAGAAGGAAGCAAGGAGAGAAGGGAGGGATAAGGAAATGGAAAGAAAGGAGGAAACCCTACCTCCTGGCTTTCGATTTCATCCCACAGACGAAGAACTCATCACTAGCTATCTCGTCAACAAGATCTCTGATTCTTCTTTTACTGCTCGAGCTATCACTGATGTCGATCTCAACAAATGCGAGCCATGGGAGCTCCCTGGCCGAGCCCCCCGAGGTGAGAAATCCAACTGGGTCATGCACGAATATCGTATCCACTCCAAATCCTCCTTCAGACTCCACAACAAGCAGGATGAATGGGTGGTTTGCAGAGTGTTCCAGAAGAGTGGTGGAGCCAAAAAGTACCCTTCCGATCACTCAAGAGGGCTAAATCCATATAGCCTCGACATAGCTCCTAACATTGTGGGACCTTCAATGATGCATATGGCGGATCCTAATTCTGGTCACTTCCTCTACGGAAGGAACTATGTCAACAGTGCTTCTGACCTAGCAGAGCTCGCTAGGGTTTTGAGAGCAGCAGGAGGGTCTGCTTCAACCGCTGGTCTCAACATACCAATGCAACCCCATCCTCAGCTTAACTATCCGGGGCCGCCTGCAGCGGGAGGGTTTATGATTTCCGGCCTCAACTTGAATCTCACTGGAGGAGGAGGAGGAGCCGCCGCCACCGGGCAACCTGTTTTCCAGCCGATGAACCCACATGATGTGGGCTCCAACATGATGACAGCTGGCAGTTCTCTTAATGGAGGAGATCATCATGTAGGGTACGGTGCTGCAGAAATCAGCAACCCTAATAATATGGGTCCAAGCAACAGGTTCATTGGGATGGAGCATTGTGTGGATTTAGATAACTACTGGCCTTCCTACTAA 984 0.4837 MQLDVSLKSEFLLEVNERSRSNYKASKPHLSKSFHSMQKKEKEARREGRDKEMERKEETLPPGFRFHPTDEELITSYLVNKISDSSFTARAITDVDLNKCEPWELPGRAPRGEKSNWVMHEYRIHSKSSFRLHNKQDEWVVCRVFQKSGGAKKYPSDHSRGLNPYSLDIAPNIVGPSMMHMADPNSGHFLYGRNYVNSASDLAELARVLRAAGGSASTAGLNIPMQPHPQLNYPGPPAAGGFMISGLNLNLTGGGGGAAATGQPVFQPMNPHDVGSNMMTAGSSLNGGDHHVGYGAAEISNPNNMGPSNRFIGMEHCVDLDNYWPSY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0536 327 MobiDBLite consensus disorder prediction 34 65 - -
Lele26g0536 327 MobiDBLite consensus disorder prediction 18 65 - -
Lele26g0536 327 SUPERFAMILY NAC domain 57 147 IPR036093 GO:0003677|GO:0006355
Lele26g0536 327 Pfam No apical meristem (NAM) protein 61 109 IPR003441 GO:0003677|GO:0006355
Lele26g0536 327 Gene3D NAC domain 108 151 IPR036093 GO:0003677|GO:0006355
Lele26g0536 327 Coils Coil 37 59 - -
Lele26g0536 327 Gene3D NAC domain 69 107 IPR036093 GO:0003677|GO:0006355
Lele26g0536 327 ProSiteProfiles NAC domain profile. 60 211 IPR003441 GO:0003677|GO:0006355
Lele26g0536 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 57 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0536 Lele-ChrLele26 3412126 3413982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0536 107 327 NAC Transcription Factor Family AT2G24430 37.344 1.86e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele26g0536 NAM 7.7e-13 No_clan