Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0506 ATGGTAATAAGCCATGCAAGAAACAAAGTCTTTATGTTGATGGGTGCTGCTTTCTCTGGAGAACAGAAGAAACAAGCTTTTTCTGGGAAGAGTGGCTACCCTTTTGGATTTGAAAGAGTCGGAAACCATAAAGTTCCAAATTCGAATCCCGTGATCTTTATGGGTGGAGAAGAGCATGTCACTATAAGCCAAAATGGATCGGACTTCGCCGGAGCTAGCTTTGAGCTGCGATTACGTAGATATTACCGTCGTGGCGATGGAGCAAAGCGATGCAATAGTAAAGAAGAGGAGGAGGAGGAGGAGGAGAAATTGACTGTGGGGAACGCGCCCAAGATGTTGTACTCTGCCTCCCCCAACTCCTCAGTGACTGTTGCTCCTTGTCATCATCTTGATCTTTCTTTCTTACTTCCCTACAGATTTTTGAGCTCAAGCAACTCTAAATGCTGTGTTAAGGGGTTGGAGAAGATAGATGAGAATGGTCCTACTGAGTGGTCAGCAGTGTCTTGTCCCCCTCCTGACACTCCAACAGAATCCATGGAGTTTCTGGCCAGATCATGGAGCCTTTCAGCCATGGAGCTCTCCAAGGCACTGAACAATACCAATATCACTACTTCTACTGTTGTCCAGATGCCTGTTTCCTGCCCTGCTACCATGTGTTCCACCGCTTCAAAAGATTCTCTAACTAATGGGTGTAGCCCTCGAATTTCACCAAGAGGCAGTGAAGAAATGAAGGAGTTATGTTTACTTCATCAGGCACTCAATCCAGAGTTCCTTTCCGGGCAACACTTACTTCGAAATGGGGTACCTCTTATTCAATCTGGCGATCACCATTATGAGTTATACTCAAATACCAGCTCAATATTACTCAACATTTCTTCTTCTTCTTTTTTGTTGGTGCAAATTTTTGCTAAGCAGCTCTGCAGGAGCTTGTTAAAAGGGAAGACCAAGGGCAGGTGGATGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATAAGGACCCATAATGCTCAATTGCATGCAGCAGTATCCGTGGCCGGTGTTGCTGCTGCGGTTGCAGCTTCAACAGCAACGCCTGAAATGCCATTTACCAACCAAAAGGATCCTCCAAGGACTTCTGCCGCTATTGCATCTGCAGCAGCTTTAGTAGCTTCTCACTGTATTGAAATTGCAGAAGATATGGGAGCTGATCATGATCAAATCTTAACCGCGGTTAACTCTGCAATTAATGCTAAGACCAATGGAGACATAATGACTTTAACAGCCGGAGCAGCTACAGCCTTGCGAGGAGCTGCTACTCTGAAAGCAAGGCTGCAAAAGGGGATTGGAAGCTCAACATTTCCTTTAGTGGAAGAAAGGTGTGAAGAAGGTAAAGAAGCAAACATCTTAGCAGCACTGGACTGTATCTTCAGAGGAGGAAAACTTCTCAAACGTACAAGAAAAGGGGATCTTCACTGGAAGCAAGTGTCCTTCATTGTGAATTCAAATCTGCAGGTTGTAGCCAAATTGAAAAGCAAGCATATGGGAGGAACGTTCAAGAAAAAGAAGACATACGTAGTCACCGGAGTGTGCAGTGATATCCCGGCTTGGCCTGAAAGGGAAAGAGAAGGCGGCATTGAGAAGAGAGCTTATTTCGGAATAAAGACAGCAAACAGGATAATAGAATTTGAATGTGCAAGTAAACATGACAAACAGATATGGATTGAGGGGATCAAGTATGTGTTGAATTGCCGTGCGAAACTACTACAATATGAGACACACTGTTCTCGGTTTTCCCATCTTGTTGATGATCATGAATTGTCATTTGTTGAGCAGGAGTGTGCATTTGAATATCATGGATTGAGCGGTGTATATGGAAGAGCAGTGACAACTTCCTTAATGCTCCTAGAGGATGAAGCGTTAATAGCACATGGACTTGGCTTAGTTGCCCTTCAAGTGTGGAGCACGCCAAGCCTTGCATCTAATATACCAAATCCACCACGGCCCATCCATCTATTGCTCGCTGATCCATCGAGAGCCATGGCCAAGATCGCTCTCGGAACCCATCGGGAGGCTACCCAGCCCGATTGCCTCCAGGCCCTCGTCATTGAGTTCGTTACCACCTTCCTCTTCGTCTTCGCCGGCGTTGGTTCCGCCATGGCCACCGAAAAGCTAGGAGCAGATGCGCTGGTAGGGTTGTTTGCCGTGGCCGTGGCACACGCACTCGTGGTGGCCACCATGATATCGGCCGGCCACATTTCCGGCGGCCACCTCAACCCAGCCGTGACGCTCGGCCTCCTCGTGGGCGGCCACATCACCCTCGTCCGTGCCATCCTTTATTGGATCGATCAATTGCTCGCATCCTCCCTGGCTTGTTACCTTCTTTACTACCTCTCTGGCGGACTGACGACTCCAGTGCACACGCTTGCGAGTGGAGTGGGGTACACTCAGGGAGTGATATGGGAGATCATCCTCACGTTTTCCTTGTTGTTCTCTGTGTACGCGACTATGGTGGATCCAAAGAAGGGAGCCATTAATGGGCTTGGCCCGACCCTGGTTGGGTTTGTTGTGGGCGCTAACATCCTGGCCGGAGGGGCCTTCTCTGCGGCCTCCATGAACCCGGCAAGATCCTTTGGGCCCGCTTTGGTCAGCGGGAATTGGACCGATCACTGGGTGTATTGGGTGGGCCCACTCATTGGGGGAGGCCTTGCGGGCTTCATGTATGAGACCTTCTTCATCAACAGATATCATGCCCTACTCCCTCGAGATGAAGAAAATCACTAG 2760 0.483 MVISHARNKVFMLMGAAFSGEQKKQAFSGKSGYPFGFERVGNHKVPNSNPVIFMGGEEHVTISQNGSDFAGASFELRLRRYYRRGDGAKRCNSKEEEEEEEEKLTVGNAPKMLYSASPNSSVTVAPCHHLDLSFLLPYRFLSSSNSKCCVKGLEKIDENGPTEWSAVSCPPPDTPTESMEFLARSWSLSAMELSKALNNTNITTSTVVQMPVSCPATMCSTASKDSLTNGCSPRISPRGSEEMKELCLLHQALNPEFLSGQHLLRNGVPLIQSGDHHYELYSNTSSILLNISSSSFLLVQIFAKQLCRSLLKGKTKGRWMKDQKERKKQEIRTHNAQLHAAVSVAGVAAAVAASTATPEMPFTNQKDPPRTSAAIASAAALVASHCIEIAEDMGADHDQILTAVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGIGSSTFPLVEERCEEGKEANILAALDCIFRGGKLLKRTRKGDLHWKQVSFIVNSNLQVVAKLKSKHMGGTFKKKKTYVVTGVCSDIPAWPEREREGGIEKRAYFGIKTANRIIEFECASKHDKQIWIEGIKYVLNCRAKLLQYETHCSRFSHLVDDHELSFVEQECAFEYHGLSGVYGRAVTTSLMLLEDEALIAHGLGLVALQVWSTPSLASNIPNPPRPIHLLLADPSRAMAKIALGTHREATQPDCLQALVIEFVTTFLFVFAGVGSAMATEKLGADALVGLFAVAVAHALVVATMISAGHISGGHLNPAVTLGLLVGGHITLVRAILYWIDQLLASSLACYLLYYLSGGLTTPVHTLASGVGYTQGVIWEIILTFSLLFSVYATMVDPKKGAINGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFMYETFFINRYHALLPRDEENH 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0506 919 PANTHER EXPRESSED PROTEIN 163 578 IPR040269 -
Lele26g0506 919 SUPERFAMILY PH domain-like 469 574 - -
Lele26g0506 919 PRINTS Major intrinsic protein family signature 846 868 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 PRINTS Major intrinsic protein family signature 731 755 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 PRINTS Major intrinsic protein family signature 883 903 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 PRINTS Major intrinsic protein family signature 691 710 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 PRINTS Major intrinsic protein family signature 768 787 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 PRINTS Major intrinsic protein family signature 813 831 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 CDD PH 472 570 - -
Lele26g0506 919 Pfam Major intrinsic protein 685 900 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 SUPERFAMILY Aquaporin-like 682 914 IPR023271 -
Lele26g0506 919 Gene3D - 449 601 IPR011993 -
Lele26g0506 919 CDD MIP 691 903 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele26g0506 919 Gene3D Glycerol uptake facilitator protein. 673 912 IPR023271 -
Lele26g0506 919 SMART PH_update 468 577 IPR001849 -
Lele26g0506 919 Pfam Plant pleckstrin homology-like region 474 577 IPR013666 -
Lele26g0506 919 ProSitePatterns MIP family signature. 749 757 IPR022357 -
Lele26g0506 919 FunFam Probable aquaporin TIP1-1 674 916 - -
Lele26g0506 919 Pfam Auxin canalisation 172 444 IPR008546 -
Lele26g0506 919 ProSiteProfiles PH domain profile. 467 575 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0506 Lele-ChrLele26 3203142 3211263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0506 673 917 Major Intrinsic Protein MIP AT2G25810 78.367 6.38e-125 376