Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0500 ATGAGTGTTGAACCCCAGAATTCTGTAGCAGAGAGCAGCTCAAACTCATTCTCCTCTCCACCAGCTTCACCGTCATCACCCCCTTCAAGCAGGGCTCTTAAACACTCGCTCTCACAGGGTCCAGAATCGAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCTGTGTATCGCGGGGTTCGTATGCGTAGTTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCACGCAAGAAATCTCGCATATGGCTGGGTACATTCTCAACCCCTGAAATGGCCGCGAGGGCACATGACGTCGCTGCTTTGAGCATCAAAGGCAACTCCGCCATTCTCAATTTCCCTCAACTAGCAGACTTGCTGCCCCGCCCCGCCTCTGTCTCTCCTCGCGATATTCAGGCAGCCGCAGCAAAAGCCGCTCAAATGGATCAGTTTGACTCGCCATCGCCATCATCATCGGCCTCGTTGTTGTCATCAGAATCTTCCATGACGTCGTTGGTTTCGGCAATGGAAATGTGCGGTGGTTCGGAGGAATTGAGCGAGATTATAGAGTTGCCGAGGTTGGAGACAAGTGAGGAGACGTGTGAGTTTAGGAAGGAGTTTGTGTTCGTGGACTCTTTATGTGATGGGTGGATTTATCATCCACCATGGTTACAGAGCATGGAAGATTGTGACGGGTACGTTGCTGATCAGCTAGGAGTGCCTGCAGAGAGTGGAATCATAGATAATCTTGATAGTTTGCTCGGGAATTAG 750 0.5013 MSVEPQNSVAESSSNSFSSPPASPSSPPSSRALKHSLSQGPESKKIKRIRDSNKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPQLADLLPRPASVSPRDIQAAAAKAAQMDQFDSPSPSSSASLLSSESSMTSLVSAMEMCGGSEELSEIIELPRLETSEETCEFRKEFVFVDSLCDGWIYHPPWLQSMEDCDGYVADQLGVPAESGIIDNLDSLLGN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0500 249 CDD AP2 58 114 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 191 - -
Lele26g0500 249 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Lele26g0500 249 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 MobiDBLite consensus disorder prediction 1 54 - -
Lele26g0500 249 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Lele26g0500 249 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Lele26g0500 249 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g0500 249 MobiDBLite consensus disorder prediction 38 54 - -
Lele26g0500 249 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0500 Lele-ChrLele26 3184227 3184976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0500 44 226 AP2-EREBP Transcription Factor Family AT5G11590 65.775 3.70e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g0500 AP2 8.4e-14 CL0081