Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0493 ATGGCTCAGACTGAATCAAAGTGGTGCATCACGTTTCTGTGGGTCCTCATCATGTCGACGGCGATGAACTTTGTGACGTCCCATGGGAAAGAAGAAGACGAGCTTCTGTTATCGTTCAAGGCTTCCATTAACGACCCACTTCACCATCTCTCAAACTGGGTCAATTCCTCTTCTGCTAGTATCTGCCACTGGAATGGTGTTACCTGCGACAGTAACTCCCATGTTCGCTCCATCAACTTCTCCGCCAAAAACCTCTCCTCCAATAATATTTCCTCCTTCTCCTCCATATTTCAACTTCCACACGTTGAACACATTGACCTCTCTGACAATCAGCTCTCGGGGGGAATCTCTTTCTCTCTCCCTTCGCTTGTCTATCTCAATCTTAGCAACAACAACTTCACGGGTCCTGTCCCATTATCGTTTTCCCGTATCCAAATTCTGGATCTCTCGAACAACATGTTTTCCGGCGAAATATCCCCTCATATTGGATCGCTTACGAGTCTGACGTATGTTGATCTGGGAGGGAATATTTTGGTGGGAAAGATTCCCGATTCTATCACTAACATGACAGGTTTAGAGTACTTGACCCTGGCTTCCAACCAGCTCGTGGGTGAAATCCCTCCAAAAATTGGCCTTATGAAGAGCTTGAAGTGGATATATTTCGGGTACAACAATCTCTCGGGTGAGATTCCAGAGGGAATCGGAGAACTGACGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACGGGACACATTCCCGGCTCTCTTGGAAACCTCACTAATCTTGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCACCGTCTATTTTTGAGCTTAGAAAGCTTGTTTCGCTCGATCTCAGTGACAATTTTCTGTCTGGTGAGATTCCCGAGCTCTTGATTCAGCTTCAGAGACTAGAGATTCTACACCTTTTCGCCAACAAGTTAACGGGCAAGATTCCAAACGCTATAACCTCTCTGCCTCGGCTCCAAGTCCTTCAGCTATGGTCTAACGGATTAACGGGCGAGATTCCAGAAGATTTGGGAAAGCATAATAACCTCACTGTTCTGGACCTTTCCACCAACAAACTTTCTGGGAAAATCCCAGATAGTTTATGTCACTCGGGCGCTCTTTACAAGCTTATCCTTTTCTCCAACTCTCTTGAAGGGGAAATACAGGATAGCTTAACCTCTTGCAAAAGCTTGCGCCGAGTTCGTCTTCAGAACAACAAGTTCTCCGGTGAATTACCCTCCCGACTAACTCAACTGTCACAGGTATATTTATTGGACATCTCCGGTAACCAACTCTCCGGCAGGATTGATGATAGGCCCTGGAATATGTCGTCGCTTCAAATGTTGAATTTGGGTAACAACAATTTCTCTGGTGAGTTACCGACCACTTTTGGTAGTACAAAATTGGAGAAACTAGACTTATCCGAAAATCGATTTTCTGGTTCTATTCCTCGTGGGTTTGGAAGCTTATCGGAGCTGATGCAATTTAATCTGAGCAATAACAAGCTATATGGTGAAATACCACAAGAGCTCACTTTCTGCAGGAAGCTAGTGCTTTTAGATGTCAGCCACAATAAACTCGCTGGTCAAATTCCGACGAGGCTCGGCGACATGCCGGTTCTGAGCTTGCTGGATTTGTCGGATAACCAATTGTGGGGTCAAATTCCAGAGAATGTAGGCAGAGTGGAATCTCTTGTGCAGGTGAACATATCCCACAACCATTTTCACGGACATTTACCGGCCACTGGAGCTTTCCTCGCCATTAATGCCAGCGCGGTCACTGGCAACGACCTATGTGGTGGTTCCGGTGACAATTCAAGCGGGTTGCCGCCCTGCAAAAAAAGCGATAAGAATCCATGGTTTGTCGTACTGTGGTTTGTGGTGGGACTTGCGGGGTTTGCATTAGCGGTCTTTCTAGTTACTTGCTCGCGTAGAAGAAAGAGTTTGGAGCTGAAGAGAGTGGAAAGCGAAGATGGGACCTGGGAGATTCTATTTTTCCACTCCAAGTTTGCCAAATCGATCACAATGGACGATGTTTTATCGTCAGCTGAAGCAGGAAACGTGATCTCCGAAGGGAAGAACAGGGTTTCATACGAAGGGAAGTGCATGGCAAGTGGCATGCAATTCGAGGTGGAGGAAATCAGAGACTTAAATTCAGTTCCTTTGAGTTTCTGGGAAGACATGGTGGAGTTGGGTAAGGTGCGGCATCCAAACATTTTTAAATTGATGGCACTATGCCGCTGGGGTAAAGGAGCATTTTTAGTGTACGGGGATGCAGAAGGAGAGAGTTTAAGTCAAGTTGTGAGGAATTTGAGCTGGGAAAGGCGACGGAAAATCGCCGTCGGGATTGCAAAAGCACTAAAGTTTCTGCATGCTCAATGCTCATCAGTTATTTTGGCTGGTGAGATGTCGCCGGAAAGCATTTTCATCGACGGAAACGACATCCCACGCTTAAAGTTGAGCCCTCCGGCATTGCTTAAGGGCTGCATTTCTTCACCTTACGTTGCCCCAGAAGCAAGGAATGGGACGGAGGTGACAGAGAAGAGCGACGTATATGGATTCGGTGTTATTCTGATGGAGTTGTTGACGGGAAGAAGTGCGGGTGAGGAGGAGGGGAGCATAGTGGAGTGGGCCCGATATTGCTATTCGGACTGTCATTGGGAAACGTGGGTCGACCTGACAATGAAGGGTGGGAAGCAGGACGACGTCGTAGAGACGATGAACCTGGCCCTGCGCTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGACGTCTTAAAATCCCTCTCTGCGGTGACCTGCGCACACACTGTTCGCTGTGTTTCTGCACTCCAACCATGA 2877 0.472 MAQTESKWCITFLWVLIMSTAMNFVTSHGKEEDELLLSFKASINDPLHHLSNWVNSSSASICHWNGVTCDSNSHVRSINFSAKNLSSNNISSFSSIFQLPHVEHIDLSDNQLSGGISFSLPSLVYLNLSNNNFTGPVPLSFSRIQILDLSNNMFSGEISPHIGSLTSLTYVDLGGNILVGKIPDSITNMTGLEYLTLASNQLVGEIPPKIGLMKSLKWIYFGYNNLSGEIPEGIGELTNLNHLDLVYNNLTGHIPGSLGNLTNLEYLFLYQNKLTGRIPPSIFELRKLVSLDLSDNFLSGEIPELLIQLQRLEILHLFANKLTGKIPNAITSLPRLQVLQLWSNGLTGEIPEDLGKHNNLTVLDLSTNKLSGKIPDSLCHSGALYKLILFSNSLEGEIQDSLTSCKSLRRVRLQNNKFSGELPSRLTQLSQVYLLDISGNQLSGRIDDRPWNMSSLQMLNLGNNNFSGELPTTFGSTKLEKLDLSENRFSGSIPRGFGSLSELMQFNLSNNKLYGEIPQELTFCRKLVLLDVSHNKLAGQIPTRLGDMPVLSLLDLSDNQLWGQIPENVGRVESLVQVNISHNHFHGHLPATGAFLAINASAVTGNDLCGGSGDNSSGLPPCKKSDKNPWFVVLWFVVGLAGFALAVFLVTCSRRRKSLELKRVESEDGTWEILFFHSKFAKSITMDDVLSSAEAGNVISEGKNRVSYEGKCMASGMQFEVEEIRDLNSVPLSFWEDMVELGKVRHPNIFKLMALCRWGKGAFLVYGDAEGESLSQVVRNLSWERRRKIAVGIAKALKFLHAQCSSVILAGEMSPESIFIDGNDIPRLKLSPPALLKGCISSPYVAPEARNGTEVTEKSDVYGFGVILMELLTGRSAGEEEGSIVEWARYCYSDCHWETWVDLTMKGGKQDDVVETMNLALRCTAMDPTARPCASDVLKSLSAVTCAHTVRCVSALQP 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0493 958 FunFam Leucine-rich receptor-like protein kinase family protein 208 304 - -
Lele26g0493 958 Gene3D Ribonuclease Inhibitor 143 233 IPR032675 -
Lele26g0493 958 Pfam Leucine rich repeat 334 394 IPR001611 GO:0005515
Lele26g0493 958 Pfam Leucine rich repeat 239 296 IPR001611 GO:0005515
Lele26g0493 958 Pfam Leucine rich repeat 478 537 IPR001611 GO:0005515
Lele26g0493 958 PANTHER UNNAMED PRODUCT 168 878 - -
Lele26g0493 958 SUPERFAMILY L domain-like 331 591 - -
Lele26g0493 958 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Lele26g0493 958 Gene3D Ribonuclease Inhibitor 360 623 IPR032675 -
Lele26g0493 958 ProSiteProfiles Protein kinase domain profile. 693 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0493 958 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 315 618 - -
Lele26g0493 958 Gene3D Transferase(Phosphotransferase) domain 1 770 953 - -
Lele26g0493 958 Gene3D Phosphorylase Kinase; domain 1 664 767 - -
Lele26g0493 958 SUPERFAMILY Protein kinase-like (PK-like) 688 941 IPR011009 -
Lele26g0493 958 Pfam Protein kinase domain 740 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0493 958 ProSiteProfiles Leucine-rich repeat profile. 359 381 IPR001611 GO:0005515
Lele26g0493 958 Gene3D Ribonuclease Inhibitor 234 359 IPR032675 -
Lele26g0493 958 SUPERFAMILY RNI-like 84 371 - -
Lele26g0493 958 FunFam Calmodulin-binding receptor kinase CaMRLK 100 207 - -
Lele26g0493 958 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 657 768 - -
Lele26g0493 958 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Lele26g0493 958 SMART LRR_typ_2 477 499 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 120 143 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 237 260 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 500 524 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 359 381 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 453 476 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 548 572 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 261 285 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 189 213 IPR003591 -
Lele26g0493 958 SMART LRR_typ_2 333 357 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0493 Lele-ChrLele26 3138546 3141521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0493 8 941 Receptor kinase-like Gene Family AT2G25790 52.929 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele26g0493 Pkinase 4.8e-14 CL0016