Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0460 ATGCAGCCCCAAATCGATCCACTTAAACATTCCATCTTATATACATCTCTCACTCATCTCCTTCCTTGCAACATTTACCTTAACTACCAGTGTACGTACCCATCTCTCCGTCCTCTCAAAATGGATCGCCAATCCATCTTCTTTCTTTTTGGACTCATATTTTCCTTGTCTCTTGCATCACAAGCCACCAGTGACGGACAATTACAGTTTCTTTCTCTAATGAAGAAGTCTCTCTCGGGGAAATACCCGCTAAATTGGGATGTCACAGATGGAAAACCTGTCTGCAACCTCACTGGAATTTTCTGCAACAACCAAGGGGAAGTCATCAATCTCGACATCTCCAGTTGGTCACTTTCTGGAACCTTCCCTTCAGATATATGCTCCTATCTGCCCGAGTTACGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAAATTCCTTGATAGCATCATCAACTGTTCTCACTTAGAAGAGCTCAACATGAATCATGTGTACCATACGAGAACCCTTCTAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAATTCCTTCAGAGGTCGGTTCCCGATGTCGGTATTTAATCTTTCCAATCTTGAGGTGCTTAACTTCAATGAGAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGATATGTATAGGATGAAAAACCTCAAGTCTGTGATCTTGTCGACATGCATGGTGCATGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCCGAAGAGCTTGGAATGCTGAAAAACTTGCAGCAACTTGAGCTTTACTATAACCAACTTATTGGCAATATACCCAAGGAGCTAGGAAATCTCACGGAGCTCAGAGACTTGGACATATCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCCGTGTGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTGATAGCAAACTCAAAAACCTTAAGAATATTGTCTCTTTATGACAATTTTTTCACCGGAGAAGTCCCAAGAAATCTGGGTCAGTTGTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAAACTGTCTGGTCCATTGCCAACAGAGGTTTGCAAGGGAGGTAAACTGATGTACTTCCTCGTTCTAGATAATTTCTTTTCTGGAGAGCTACCTGAAGGTTATGCCAAGTGCTGGACCATGTTGAGGTTTCGAGTCAGCAACAACCATTTGGTGGGCTCAATTCCCGAGGGGCTCCTTGGTCTCCCGCACGTTTCCATAATTGATTTGAGTAACAATAATTTAAGTGGCCCAATATCCGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGGGTTATACCTCCGACCATCTCCCGAGCTACGAATCTGGTCAAGATTGATTTCAGCAACAACCTTTTGTCCGGTCCTATACCTCTCGAAATCGGCAATCTTAAAAGGCTTAATTTACTGATGTTGCAAGGGAATAAGCTGAATTCTTCCATCCCCGGCTCACTTTCCTTATTAAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGATTCTCTGATCTGCTACCGAACTCTATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTCCATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCGGGGAATCCTGGTCTGTGTGTGTCGCCCGTCTATGCCAACTCATCGGATCAAAATTTTCCCTTGTGTTCAAAGACTAGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTTTTGATCATAACTGGATCAGCCTTGTTTTTGAAACGTAGGTGTAGCAAAGAGAGGGCTGCAGTGGAACATGACGAAACACTGTCTTTGCCATTCTTCTCGTATGACGTGAAGAGCTTTCACAGGATAACAATTGACCAACGGGAGATCACCGAGGCCATGGTCGAAAAGAATATAGTGGGGCATGGAGGGTCTGGTACAGTTTACAAGATCGAGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTATGGAGTCGAAAGTCAAAGGATTCGGTTCCAGATCAGGATAGTTTAGCTCTAGACAAGACATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATAGTCAAGCTTTACTGCTACTTCTCAAGTTTGGATTGCAGCTTGTTAGTTTATGAGTACATGACAAATGGTAATCTTTGGGATGCTCTACACAAAGGTTCGGTCCATTTGGATTGGCCTACTCGCCATAAGATTGCACTAGGGACAGCACAGGGTCTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCAACTAACATCCTTCTCGATGTTGATTACCAACCCAAGGTTGCAGATTTCGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGAGGGAAGGACTCCACATCTACTGTTATTGCTGGCACATATGGTTACTTGGCACCAGAATATGCTTATTCTCCCAGAGCAACTATCAAGTGTGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAGCATCGTATATTGGGTTTCAAACAAAGTGGACAGCAAGGAAGGGGCTAGTGAGGTATTAGACAAGCAATTAGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCTTCGGCCGACCATGAAAGAGGTAGTTCAAGTGCTGATTAAAGCAGACCCGTCTAGCAAGTTGTCCAATAAGACCAAAGAAACATCAAATGCCACTTTACCAAAGAACTCATCATTTGAACTGTAG 2994 0.4362 MQPQIDPLKHSILYTSLTHLLPCNIYLNYQCTYPSLRPLKMDRQSIFFLFGLIFSLSLASQATSDGQLQFLSLMKKSLSGKYPLNWDVTDGKPVCNLTGIFCNNQGEVINLDISSWSLSGTFPSDICSYLPELRFLRLGHNRLRGKFLDSIINCSHLEELNMNHVYHTRTLLDFSPMKSLRILDLSYNSFRGRFPMSVFNLSNLEVLNFNENAGFNLWELPEDMYRMKNLKSVILSTCMVHGRIPASIGNVSTLVDLELSGNFLTGQIPEELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDISVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFFTGEVPRNLGQLSGMVVLDLSENKLSGPLPTEVCKGGKLMYFLVLDNFFSGELPEGYAKCWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSNNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPLEIGNLKRLNLLMLQGNKLNSSIPGSLSLLKSLNVLDLSNNLLTGSIPERFSDLLPNSINFSNNLLSGPIPPSLIKGGLVESFSGNPGLCVSPVYANSSDQNFPLCSKTSNKKRLSTFWVAGISVVLIITGSALFLKRRCSKERAAVEHDETLSLPFFSYDVKSFHRITIDQREITEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWSRKSKDSVPDQDSLALDKTLKTEVETLGNIRHKNIVKLYCYFSSLDCSLLVYEYMTNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGGKDSTSTVIAGTYGYLAPEYAYSPRATIKCDVYSFGVILMELITGKKPVEAEFGENRSIVYWVSNKVDSKEGASEVLDKQLEGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNKTKETSNATLPKNSSFEL 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0460 997 ProSiteProfiles Protein kinase domain profile. 688 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0460 997 FunFam receptor protein-tyrosine kinase CEPR1 671 773 - -
Lele26g0460 997 Gene3D Ribonuclease Inhibitor 65 344 IPR032675 -
Lele26g0460 997 Gene3D Transferase(Phosphotransferase) domain 1 774 993 - -
Lele26g0460 997 FunFam Receptor protein-tyrosine kinase CEPR1 323 609 - -
Lele26g0460 997 SMART serkin_6 688 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0460 997 SUPERFAMILY Protein kinase-like (PK-like) 677 968 IPR011009 -
Lele26g0460 997 Gene3D Ribonuclease Inhibitor 345 610 IPR032675 -
Lele26g0460 997 FunFam Leucine-rich repeat receptor-like protein kinase 217 319 - -
Lele26g0460 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 286 969 - -
Lele26g0460 997 Pfam Protein kinase domain 690 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0460 997 Gene3D Phosphorylase Kinase; domain 1 671 773 - -
Lele26g0460 997 SUPERFAMILY L domain-like 292 603 - -
Lele26g0460 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Lele26g0460 997 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 774 986 - -
Lele26g0460 997 MobiDBLite consensus disorder prediction 976 997 - -
Lele26g0460 997 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Lele26g0460 997 SUPERFAMILY RNI-like 70 385 - -
Lele26g0460 997 SMART LRR_typ_2 371 395 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 539 562 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 323 346 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 130 155 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 201 227 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 275 299 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 515 538 IPR003591 -
Lele26g0460 997 SMART LRR_typ_2 443 467 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0460 Lele-ChrLele26 2929782 2933077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0460 63 984 Receptor kinase-like Gene Family AT5G49660 65.595 0.0 1227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele26g0460 Pkinase 9.1e-46 CL0016