Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0453 ATGGGATTATCTGATTCTTCAACCGTGGACAGCTCAGTCCAGTCCTACTCAGATAAGACTAAAAGTAACCTAAACCTAAAAGCCACAGAGCTGAGGCTTGGTCTTCCAGGATCTCAGTCTCCTGACCGAGACTCGGATCTCTGCTTGAGAAGCTCAACTCAATTGAATGAGAAATCCTTGTTTCCATTGCGCCCATTAACCGATGATCACCACTCTTCAACAAAGACTGCTGTTTTGGGCAGCAAGAGAGGGTTCTCAGATGCCATGAATGGGTTCTCAGAGGCAAAGTTTCTGGCTGATTCAGAGGCCAATAATGTAATGTCCCCCAGGCCTTCTCATAACATGGGATTAAAAACTGGCTCTATACTTGAGAATCTCGGGGCTCAAGCCAAAGCCAAAGAAGTAACACCAACAAAGGCAACACTTGAGAGGCCTCATTCTGTCAATGAAACTAGAGCAAATCTCGAAGGTTCTGCAAATAACAATGGCAATGCACCAGCTACCAAGGCCCAGGTTGTAGGTTGGCCTCCTATAAGATCATTTAGGAAGAATTCTCTGGCTACTACTTCAAAGAATACTGAAGAAGTAGATGGAAAAGCAGGATCCGGTGCATTGTTCATCAAAGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGATTTGAAGAACTACTCTGCATATCCAGAACTGTCATCCGCACTGGAGAAGATGTTCAGCTGTTTTACCATAGGTCAATACGGCTCCCATGGAACTCTAGTCAGGGAGATTTTAAATGAAAGCAAGCTGAAGGATCTGCTTCATGGGTCTGAATTTGTCCTAACCTATGAGGACAAAGATGGGGACTGGATGCTTGTGGGAGATGTTCCTTGGGAGATGTTCATTGATACATGCAGGAGGCTGAGGATCATGAAGAGTTCCGATGCTATTGGTCTGGCTCCAAGGGCTGTGGAGAAAAGCAAGAGTAGGAACTAG 975 0.4503 MGLSDSSTVDSSVQSYSDKTKSNLNLKATELRLGLPGSQSPDRDSDLCLRSSTQLNEKSLFPLRPLTDDHHSSTKTAVLGSKRGFSDAMNGFSEAKFLADSEANNVMSPRPSHNMGLKTGSILENLGAQAKAKEVTPTKATLERPHSVNETRANLEGSANNNGNAPATKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKAGSGALFIKVSMDGAPYLRKVDLKNYSAYPELSSALEKMFSCFTIGQYGSHGTLVREILNESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0453 324 ProSiteProfiles PB1 domain profile. 204 306 IPR000270 GO:0005515
Lele26g0453 324 SUPERFAMILY CAD & PB1 domains 202 305 - -
Lele26g0453 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 311 IPR003311 GO:0005634|GO:0006355
Lele26g0453 324 FunFam Auxin-responsive protein 199 316 - -
Lele26g0453 324 Pfam AUX/IAA family 29 315 IPR033389 -
Lele26g0453 324 Gene3D - 199 318 - -
Lele26g0453 324 MobiDBLite consensus disorder prediction 1 27 - -
Lele26g0453 324 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0453 Lele-ChrLele26 2867252 2869578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0453 218 309 B3 DNA Binding Superfamily AT1G19220 31.522 4.18e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele26g0453 AUX_IAA 2.4e-90 CL0072