Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0449 ATGATTGGCCCACGGCAGAGACTCCTCGAAGTTGGGAATTGCGTGGCTGGAAGGAACGGTTGATATTTTACTGAGATTTCCGGAGTATTTACTTCTCACCGTATTTTATTCAATCCCACTTTTGTCCCCACTCCAATTTCAGATCTTCGTTCCTTGCGTTCTTCTTCTATTCTCTGTTTCTCTCCTCGCTCAGATATGTATACCAACGAGGGCATAAGCATCTATCCATCGCACCGCTGTAAAACTCTTCATCTGGTTAGACATGCACAAGGGACTCACAACGTAGCAGGAGAAAAATACCATGAAGCATACATGTCTTATGATTATTTTGATGCACAATTAACCCCTCTTGGCTGGAAGCAGGTTGATCATCTGCGGTCGCACGTTCAAGCATGCGGTCTTTCCAAGAAAATCGAATTAGTGATTTCTTCCCCCTTGTTGAGGACCATGCAAACCGCAACTGGAGTTTTCGGTGGTGAAGCTTACACTGACGGGATTGATGCTCCTCCTCTGATGAAGGAAAATGTGGGACCTAGTGAACATGCTGTAATTTCTAGTCTGAATTCCCCTCCATTTATAGCATTTGAGCTCTGCCGGGAGCATTTGGGAGTTCATCCTTGTGATAAGAGAAGAAGCATTCATGAGTACCGGGATTTGTTCCCTGCAATTGACTTTTCACTGATAGAAAGTGACGAGGACATTTTGTGGACACCTGACATTAGAGAGAAGGATGAAGAAGTTGCTGCTAGGGGGCTGAAGTTTTGGAAATGGTTATGGACACGTAAGGAAAAGGAGATAGCAATTGTTTCTCACAGTAGTTTTCTATTTCATGCCCTAAGCGCTTTTGGAAATGACTGCCATCCAACTGTGAAGAGTGAAATATGCAAACACTTTGCTAATTGTGAGCTGCGTTCCATGGTTATCGTTGACAGAGGTTTGATTGGATCAGATAAGTCAACTACAAACTGTCCTGGCAAGATTCCTCATGGCCTTGATCTTCCTAGTGATGTTGCTGACGAGAAAAATAAAGGGAATGGACCGACCCAGTAA 1050 0.439 MIGPRQRLLEVGNCVAGRNGXYFTEISGVFTSHRILFNPTFVPTPISDLRSLRSSSILCFSPRSDMYTNEGISIYPSHRCKTLHLVRHAQGTHNVAGEKYHEAYMSYDYFDAQLTPLGWKQVDHLRSHVQACGLSKKIELVISSPLLRTMQTATGVFGGEAYTDGIDAPPLMKENVGPSEHAVISSLNSPPFIAFELCREHLGVHPCDKRRSIHEYRDLFPAIDFSLIESDEDILWTPDIREKDEEVAARGLKFWKWLWTRKEKEIAIVSHSSFLFHALSAFGNDCHPTVKSEICKHFANCELRSMVIVDRGLIGSDKSTTNCPGKIPHGLDLPSDVADEKNKGNGPTQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0449 349 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 77 318 - -
Lele26g0449 349 MobiDBLite consensus disorder prediction 325 349 - -
Lele26g0449 349 CDD HP_PGM_like 82 153 IPR013078 -
Lele26g0449 349 Gene3D - 75 323 IPR029033 -
Lele26g0449 349 FunFam Phosphoglycerate mutase-like protein 1 77 324 - -
Lele26g0449 349 Pfam Histidine phosphatase superfamily (branch 1) 83 156 IPR013078 -
Lele26g0449 349 SUPERFAMILY Phosphoglycerate mutase-like 81 311 IPR029033 -
Lele26g0449 349 SMART PGAM_5 82 278 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0449 Lele-ChrLele26 2828616 2834154 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0449 26 2828616 2834154 Lele01g0111 01 663967 665736 CCT
Lele26g0449 26 2828616 2834154 Lele03g0112 03 628797 630573 CCT
Lele26g0449 26 2828616 2834154 Lele04g0108 04 632708 634432 CCT
Lele26g0449 26 2828616 2834154 Lele27g1646 27 21976384 21981438 hybridization
Lele26g0449 26 2828616 2834154 Lele28g0444 28 2811732 2817195 hybridization