Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0447 ATGAATGTGGAAGCAGTTTCTCATGGAAACGCTGGCGCCCCTAAATTCCTGAAATCTGATGCAATTCTTAAAACCCTAACAAATGAGAATCATTCACTCGCTTCCCACCCCGATTCCCGCCATTCCTCGCCTTATTCTCAAGAAGTCGACCACGAGAATCCATCGATGGAAGATCCTCTTTTCACCACTACCACCACCAACAACCACAAAGCGAAGTTCGTGTGCAGCTATGGCGGAAATATTCAATTTAGGAGCCATGATAATCAGCTCGCTTACGTCGGCGGTGATACCAAGATCATAACCGTTGATCGCAGCATTACGTTCTCGGCTATGATGGCGAAGCTCTCTTCTCTCTGCAATGCTGATGTTTTCGTCAAGTACCAACTTCCCGGGGAGGATCTTGACGCTTTGATTTCGGTCACTAACGATGAGGATCTAGAGCACATGATGGTTGAGTATGATCTGTCTCAACGTGCGTCGGTGAAGCCCGGTAGGTTGAAGCTATTCCTATTTCCACCAAAATCGTCGGCTCCGACCAGTTTCGAGTCGAACGATTTGAAACCGGAGCATCAGTGGTTTGTTGACGCTCTCAATTCCGTGCACATTCCACATGTTAAGGGATCTTCAACGTCGGCACCTATATCGGTTGCGAATTCGGATTTTCTCTCTGGATTGGATTACAGATATTCGGTTGTTTCAACGACCAAATTGCCTGATTCTGTTACTCCTGCTGCGTCCGCCATTCCGCATGTGGAGGCAAATGGTTCGCCTACGGGAACGGACGGTGGATCGGAAGATCGGCACATCATTGGAGAACCGGCGGGATCACCAACTGAGATTCAGACACGGATCGAGGAGTCACAGAGATTGCATTTGGAAAAGAATGACCAGATCCTACTAAAAGGCGATGAATACAATGGCACAGTTAGTAAAACTATGGACCATTACTCTCAGAAAAATCCCGGGAAACAGGAGACGCTGCCTGTTCACATAGTTCCAGCTCCCGTATCAATTCCGGGATCGGCGGCAGTTTATTCGCCTGAAAGACTCATGACAAGTGCTAGTTATTCGTTAGCGGCTCCTGCAACTACTGTTACTGAGCCGCCGTTGTATCTCATTGCAACCCCAGCCGTAATGTACCATGCTACTACTTTGCGAGCCATGATTGGACCTGTAGGTCAGCCATACTATCGAGTCCCGAGAATGGTCCAAACAAGTGAATTCTCCAATGGAGCACCCCTGGCATCACTTTCACTTTCGCATTCACATTCACGGTCCAGAATTGGGGCTAACGGCGTTGAAACTAACGCACTAGTACAGCAAAAGGTTGAGGTGGCAGAACCCTCTGGATACCCACAGATAGTATACGAGGACGCCGGAAGGCAGGTCTTCATTGCGGCTCCGGCAACTTGGGGTGGGGTGGTGCCTCCACACCTAGAGGCGGCTGCTGGAAGTGATGGGACACAAGGCGGTGGGGCAACAACTCTGAATCAAGAAGGGAAGGTTTCTAAAGCGGCTCCGGCTGTATGA 1530 0.4948 MNVEAVSHGNAGAPKFLKSDAILKTLTNENHSLASHPDSRHSSPYSQEVDHENPSMEDPLFTTTTTNNHKAKFVCSYGGNIQFRSHDNQLAYVGGDTKIITVDRSITFSAMMAKLSSLCNADVFVKYQLPGEDLDALISVTNDEDLEHMMVEYDLSQRASVKPGRLKLFLFPPKSSAPTSFESNDLKPEHQWFVDALNSVHIPHVKGSSTSAPISVANSDFLSGLDYRYSVVSTTKLPDSVTPAASAIPHVEANGSPTGTDGGSEDRHIIGEPAGSPTEIQTRIEESQRLHLEKNDQILLKGDEYNGTVSKTMDHYSQKNPGKQETLPVHIVPAPVSIPGSAAVYSPERLMTSASYSLAAPATTVTEPPLYLIATPAVMYHATTLRAMIGPVGQPYYRVPRMVQTSEFSNGAPLASLSLSHSHSRSRIGANGVETNALVQQKVEVAEPSGYPQIVYEDAGRQVFIAAPATWGGVVPPHLEAAAGSDGTQGGGATTLNQEGKVSKAAPAV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0447 509 CDD PB1_UP2 74 171 - -
Lele26g0447 509 PANTHER OS05G0427100 PROTEIN-RELATED 36 365 - -
Lele26g0447 509 Pfam PB1 domain 86 172 IPR000270 GO:0005515
Lele26g0447 509 Gene3D - 91 172 - -
Lele26g0447 509 MobiDBLite consensus disorder prediction 480 509 - -
Lele26g0447 509 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 90 173 - -
Lele26g0447 509 SMART PB1_new 85 173 IPR000270 GO:0005515
Lele26g0447 509 MobiDBLite consensus disorder prediction 31 55 - -
Lele26g0447 509 SUPERFAMILY CAD & PB1 domains 86 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0447 Lele-ChrLele26 2820220 2822410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0447 69 200 MAP Kinase Kinase Kinase AT5G57610 41.176 1.56e-26 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0447 26 2820220 2822410 Lele27g1649 27 21988970 21990568 hybridization
Lele26g0447 26 2820220 2822410 Lele28g0442 28 2803461 2805073 hybridization