Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0446 ATGGTAGTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTGAAGTTCGCGCAGAACACAGAGACCGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAACATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCATATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGTACTAAGATCTATATCATATTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATGGGCGTATTAGTGAAAATGAATCAAGAAGATACTTCCAACAGCTTATTGATGGTGTAGACTTTTGCCACAGCAAGGGAGTTTACCATAGAGATTTAAAGCCTGAAAATCTCTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACAACTTGTGGGACACCAAACTATGTAGCTCCTGAGGTACTGAGTCACAAGGGTTACGATGGTGCTATGGCAGATGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACCACCTTATACAGTAAGATTGATAGAGCAGAGTTTTCATGCCCGACATGGTTTCCCGTGGGAGCAAAATCTTTAATACGTAGAATTTTGGACCCAAATCCTCAGACTCGCATAACTATTGAACGGATACGAAATGATGAGTGGTTTGAAAAAAACTACGTCCCTGTCAGTCTACTTGAGTATGAAGAAGTAAATTTGGATGATGTAAATGCAGCTTTTGACGATGCTGAGGATCATATGGCTAATGAACAGAGTGAAAATAAAGACACTGGTCCTTTGATGCTTAATGCATTTGACTTGATAATCCTGTCTCAAGGCTTAAACCTGGCATCACTATTCAATCGTCGACAGGAGGACTCTATGTACTACCAAACACGCTTTATCACTCAAAAGCCAGCAAATGTGGTTTTATCAACTATGGAAGTTGTGGCACAATCGATGGGATTTAAGACTCATATTCGCAACTATAAGATGAGAGTAGAGGGTATTTCAGCAGACAAGACTTCTTATTTTTCGGTTATGCTGGAAATTTTTGAAGTTGCTCCCACATTTTTAATGGTGGACATTCAAAAAACAGCTGGAGATGGGACTGAATACCACAAGTTTTACAAGACATTTTGTAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCGAGCAAATCAAAGATATCCAAGACTAAAAGCAAGAAACGTTAG 1344 0.4107 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHNMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRISENESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYDGAMADVWSCGVILYVLLAGYLPFDELDLTTLYSKIDRAEFSCPTWFPVGAKSLIRRILDPNPQTRITIERIRNDEWFEKNYVPVSLLEYEEVNLDDVNAAFDDAEDHMANEQSENKDTGPLMLNAFDLIILSQGLNLASLFNRRQEDSMYYQTRFITQKPANVVLSTMEVVAQSMGFKTHIRNYKMRVEGISADKTSYFSVMLEIFEVAPTFLMVDIQKTAGDGTEYHKFYKTFCSNLEDIIWKPPLEASKSKISKTKSKKR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0446 447 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Lele26g0446 447 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0446 447 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Lele26g0446 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lele26g0446 447 Gene3D Kinase associated domain 1, KA1 302 429 - -
Lele26g0446 447 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Lele26g0446 447 Pfam NAF domain 305 364 IPR004041 GO:0007165
Lele26g0446 447 FunFam Non-specific serine/threonine protein kinase 303 428 - -
Lele26g0446 447 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0446 447 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Lele26g0446 447 Coils Coil 279 299 - -
Lele26g0446 447 CDD CIPK_C 309 425 - -
Lele26g0446 447 SUPERFAMILY Protein kinase-like (PK-like) 6 302 IPR011009 -
Lele26g0446 447 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Lele26g0446 447 Coils Coil 432 447 - -
Lele26g0446 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 421 - -
Lele26g0446 447 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Lele26g0446 447 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0446 Lele-ChrLele26 2811550 2817650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0446 1 389 CBL-interacting serine-threonine protein kinases AT4G24400 82.005 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele26g0446 Pkinase 2.5e-71 CL0016