Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0436 ATGCCTCACAGAGCGACTTACTTTTTCCCAAGGCAATTCCCGGAGCGGGGGTTGAATGAATCTTCGAAACAGCTATTAGATCACGAGGAGAAGAAAAATGTCAACTCCATCAAATCAGAAACCTTTGACGTTGAAAGCGACCCCAAAAAGGCAATTACAACAACTACTGCTACAACTACAACTACAACGGACGATGTCGTTTTCCCGTCTGGGAAACACTCAGCTGTATCCGACCTTTTCACGGGCAATGGCAAGTTCCGGACTAAGCAGAAGCAACTTGCTGCTTTCCGCGACTGGTTGATAGAGAAAAAAGTGGATAGATCGAGTCACGTGAAACCACACTCCCGCCGGTTATCCTGTGAAGGGGACCGCGAGCTTCTGCTTCCGTCGGAGTTCGTGCCACCGCCGCCTCCACCGGAGACAGTGAAAGATGCAATCGACCGGAGTTTTGACCGCCAAGTGTCGTTGCCGCGGTTATCCAGCGGCAGTAGTTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGACGGCAATTTTTCTAGCGACATCAAGGAGGAGACGACGTCGTCTCGAGTCTCCACCAGAACAAGAAGACTGGAGGAAGAGGAGGAAGAAAGTAAAGAGACGGTGGCGCAGAAGTGCAAAGAGAGCTACTGCCTGCAGATCACGCTGGCTAAGAGACTCACCTGTCTAGAAAGTCTCGCTGCTGATGAGCCTGTGCTTACTTTGGACGCGGGAATCGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCATACTCCGACAAAATATCAGATGGTTTTTATAACATATTGGGGATGAATCCATATCTGTGGGTGATGTGCAATGAGCTGGAGGAAGGTAGGCGGCTCCCACCTTTGATGACGCTTAAAGCAGTCGAACCAAGCGAGACGTCTATGGAGGTGGTTCTTGTAGATAGACACGAGGACTTTAGGCTAAAGGAACTGCATGATAAAGCACAAGAATTGTATTGTGATTCAGAGAACACCTTGGTATTGGTGGAAAAACTTGGAAAACTTGTTGCGATATATATGGGGGGTACCTTCCCGGTGGAGCAAGGAGATCTCCACAGGCAATGGAAGTTGGTTAGTAAGAGATTGAGGAATTTTCAGAAGTGTGTTGTGCTTCCTATCGGCAGCCTATCTGCAGGACTTTGCCGGCATCGGGCAATCCTCTTTAAGAGATTGGCAGATTACATTGGTTTGCCATGTCGTATTGCTCGAGGTTGCAAGTACTGTGCTGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGGCAACTCTCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCTCTTCAAATTTCTCATATACTGGAATCTCGGTATCCTTATATGGATAATGCATCAAGTTCTCGGTGTTCTAGTTGCATAGACAAAAGTCATTTATATTCTGGCTGTACAGAGAAAGATCAACTGGTCAAAGGAAATAATTTGCGTAAACGTCCTGTAAACTCAAAATATGCTTCAGTTGATCAAACTCATGCAGTTAATGTAGAGGAACATGAAGTTCTAGGTTCAAATTTGCCTTCCATTCAGGAAGGTGTTTCTGAAGACCTGCATTCAGCCACTGAGGCATTGTTGCATGAATATCCGATGCATGTTGAGGATTCAGTGGTCATAAAAGGAACTTCCAATAATGAGATCATTGTAACTGGAAGTCCAGCGGTAAAAGCAACTTCTAAGAAACCTATACTGGGCCCATCCGGCCAGTCAGAACAAGAATCTGTAGATAGTAGACTTAAAAACCGTGACAATTTTTCTGCTGCAAACATTCCAAGATATTTGAATCTTGAACCATCACTCGCCATGGATTGGCTTGAAATATCGTGGGACGAATTAAGCATTAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTTCACCGTGCTGAATGGCATGGATGTGATGTTGCAGTTAAGGTTTTAACAATTCAGGACTTCCAGGATGACCAGTTGAAAGAGTTTCTCAGAGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTTGTGCTCTTCATGGGTGCAGTTACAAAACGGCCTAATCTATCAATTGTAACAGAATATTTGCCGAGGGGTAGTTTATTCCGCCTGATACATAGGCCAGCATCTGGTGAAATGTTGGATCAGAGAAGACGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATTGTGCATTGGGATCTCAAATCTCCAAATTTGTTAGTTGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCGAGATTTAAGGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCGGAATTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGCTTTGGAGTCGTCCTGTGGGAACTTGTAACCATGCAGCAACCATGGAATGGACTCGGTCCTGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTTGCTATCCCTCCAAACATCTCCCCAGTATTGGCCTCCCTCATGGAATCTTGTTGGGATGATGATCCCAAGAAACGGCCTTCTTTCACCAGTATAGTAGAATCGCTAAAGAAGCTGCTGAGATCTCCGGTGGAGATGATAAAGATGGAAGGGGCATAA 2793 0.4547 MPHRATYFFPRQFPERGLNESSKQLLDHEEKKNVNSIKSETFDVESDPKKAITTTTATTTTTTDDVVFPSGKHSAVSDLFTGNGKFRTKQKQLAAFRDWLIEKKVDRSSHVKPHSRRLSCEGDRELLLPSEFVPPPPPPETVKDAIDRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKEETTSSRVSTRTRRLEEEEEESKETVAQKCKESYCLQITLAKRLTCLESLAADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEEGRRLPPLMTLKAVEPSETSMEVVLVDRHEDFRLKELHDKAQELYCDSENTLVLVEKLGKLVAIYMGGTFPVEQGDLHRQWKLVSKRLRNFQKCVVLPIGSLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPLQISHILESRYPYMDNASSSRCSSCIDKSHLYSGCTEKDQLVKGNNLRKRPVNSKYASVDQTHAVNVEEHEVLGSNLPSIQEGVSEDLHSATEALLHEYPMHVEDSVVIKGTSNNEIIVTGSPAVKATSKKPILGPSGQSEQESVDSRLKNRDNFSAANIPRYLNLEPSLAMDWLEISWDELSIKERVGAGSFGTVHRAEWHGCDVAVKVLTIQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPNLSIVTEYLPRGSLFRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVVLWELVTMQQPWNGLGPAQVVGAVAFQNRKLAIPPNISPVLASLMESCWDDDPKKRPSFTSIVESLKKLLRSPVEMIKMEGA 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0436 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Lele26g0436 930 MobiDBLite consensus disorder prediction 181 207 - -
Lele26g0436 930 FunFam Serine/threonine-protein kinase CTR1 739 924 - -
Lele26g0436 930 SMART serkin_6 660 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0436 930 SUPERFAMILY Protein kinase-like (PK-like) 636 913 IPR011009 -
Lele26g0436 930 Pfam Protein tyrosine and serine/threonine kinase 660 914 IPR001245 GO:0004672|GO:0006468
Lele26g0436 930 CDD STKc_MAP3K-like 666 914 - -
Lele26g0436 930 ProSitePatterns Protein kinases ATP-binding region signature. 666 687 IPR017441 GO:0005524
Lele26g0436 930 Pfam Ethylene-responsive protein kinase Le-CTR1 252 460 - -
Lele26g0436 930 Gene3D Phosphorylase Kinase; domain 1 653 737 - -
Lele26g0436 930 ProSiteProfiles Protein kinase domain profile. 660 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0436 930 MobiDBLite consensus disorder prediction 188 207 - -
Lele26g0436 930 PRINTS Tyrosine kinase catalytic domain signature 841 863 IPR001245 GO:0004672|GO:0006468
Lele26g0436 930 PRINTS Tyrosine kinase catalytic domain signature 885 907 IPR001245 GO:0004672|GO:0006468
Lele26g0436 930 PRINTS Tyrosine kinase catalytic domain signature 734 747 IPR001245 GO:0004672|GO:0006468
Lele26g0436 930 PRINTS Tyrosine kinase catalytic domain signature 775 793 IPR001245 GO:0004672|GO:0006468
Lele26g0436 930 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 213 919 - -
Lele26g0436 930 Gene3D Transferase(Phosphotransferase) domain 1 739 926 - -
Lele26g0436 930 FunFam Serine/threonine-protein kinase isoform 1 650 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0436 Lele-ChrLele26 2682788 2688504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0436 1 929 MAP Kinase Kinase Kinase AT4G24480 58.197 0.0 1076
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele26g0436 PK_Tyr_Ser-Thr 2.1e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0436 26 2682788 2688504 Lele27g1658 27 22105700 22111253 hybridization
Lele26g0436 26 2682788 2688504 Lele28g0433 28 2683641 2689344 hybridization