Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0430 ATGACCCATTACATGCACACCCCAGGCCCACCTAAGCCCTTGAAGATGAGGTTTAATTTTGCCTATTATTTCAATGGATCATTTTTTTCATTATTTGCTTGGTCAGCAATTAAAATTTCCTTTGACATAATCAAAACCGGGAACCTTGTGCCACCGGGTTTTGGCTGTTTTCTACCCTCGAAAAGTTGGGTCAGGGAGAGCGCTCTTTGCTTGTCTCATTCTTCTTTCGGCTTCGACGAGGACTTAACAATGATGGAAGATGACAAGAAGAGCAAGAAGGTCGCTTTGAGCGAGGAAGACATTGCTGCTCTCTTAGAGAAGTATGATGCAATCACCATTCTAACTTTACTTCAGGAATTGTCAAATTTAAACTATCCTGAGGGCAAGATTGATTGGAATGAGTTGGTAAAAATTACAGCAACTGGGATATCAAATGCTCGAGAGTGTCAGATGTTGTGGCGTCATCTTGCTTATAGTGATGACTTGACTGAAAATTTGGAAGACGGTGCTGAACTTCTGAGTTCAAGATTTGACTATATTGGCGTGAATATACAGGGTAGAAGAGATCGTTTTGGCTTTAGAAATCCAGTGTTTTGCCAGGACGACGATGGTGACTTGGACAGTGACATGGAAGTGGTACCCCGTATAAACAATGAGGCTGCATCGGAGGCTTCAGCTTGTGTGAAGGTTATGATAGCTTCTGGTTTGCTTAGTGAAATGGGTCCTAGTAGCTCTACAATTGAAGCTCCGATGACCATAAATATTCCAAATTGTCATTCATCTACAAATCCTGAGGAAAATATAAAGCCCTCAAACTTGATACAAGGAACAAGTGTTATTTTTCCTGTTACTGTTCAGAGACAGACACTACCATCTGGATCTGTGACTGAAGGTGTAGAAGCCAAGGGAACAACTGGTGGCAAATTGTCTTCCAAAAGGAGAAGAAAAGCGTGGTCAGAAGAAGAGGACAAGCAACTACAAGCAGCTGTTCAGAAATGTGGTGAGGGAAATTGGGCAACCATGTCGAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGTTGGCTCAGGTGGGTTTTATTATCGTAAATGGTTGTGAATTATATGGCCATTCTCTATTTAATCATCCTATCATATGGTCCCTAAGTACATCATGTTTGCCAATGGCACTATGGATTCATAGTTACAAGTATATGCTCATGCTTCTTTTGTCCATTAAGATGGTCATGGATATTGTAAGAAAGAACAGAGAAGACAATAGTCTTGCCTTGGGGTACTATAAGCGGACCCCAAAAGTGAGAACATTCCATGAAGAATGTAAAAGATTTGGACAGAAGGAAGGAAAACCATCCTGGCAATGCGCGAGGTGGAGCATTTTACGGAAGAAAGATGGCACTACAAATTCAGGAACAAACTTGACCAGCTCGCAGTTTACTGCTGAACAATTGGCAACTCGTCACTCATTATCTTTAGCCCTTGATATGCCATTAAAAAAATTAACTGCTCCTGGAACAATTGATCCTGCTAGGACATCATTAAATGCATCAATTATGAACCCTGTGCAACCTTTTAATACTGCTGAAGCTTCAACAGTTCAGAGCAGTTCTGGGCCACCTCAGCTTCCATCTCAACAACCTGCATTGGGTCCTTCTGCTTCCTTAGCAAATTCTATAGTCCCTGAAAGAACAATGCTGATGTCAAATACAAGTGCTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGTTGGTGCGCGTATTGTCTCCTCGGCAGACATTTTGTCAGGGCAAAAGGCTACTGAGGACAAAAGCGCTGGACAAATTATGCCCACAGGCAATTCTTCAATGAGGCTGTCCGCATCTGCTGGTTCTGTCATTCACCCAAAAGTTCTTATAAATCCAGTTGTTTCTCCTAAAGCTGTTGCTACTGCACCTCCTCCTTGCACTACTGCTGTTAAATTTGTCTCCCCATCGGGTGAGAGTACTTCTAATGCCCATAGCTCTGTGGTCAATAATCTTCCCTTGGAGCAAGTTAATCCTAACCAAGAATCCAAAGTCTCTAATTCTGGTGTTGAAACAAAGGCGAGGAACCAAGTTGATGAGGCACCAGTCACAGAAAGTATACCTAATGAGGAGGTTTTAGAGAATAAACCAGTTTCACAAAATTCAGGAGAGCCGGATGAGCAGGGAGTAGTTTGA 2199 0.4234 MTHYMHTPGPPKPLKMRFNFAYYFNGSFFSLFAWSAIKISFDIIKTGNLVPPGFGCFLPSKSWVRESALCLSHSSFGFDEDLTMMEDDKKSKKVALSEEDIAALLEKYDAITILTLLQELSNLNYPEGKIDWNELVKITATGISNARECQMLWRHLAYSDDLTENLEDGAELLSSRFDYIGVNIQGRRDRFGFRNPVFCQDDDGDLDSDMEVVPRINNEAASEASACVKVMIASGLLSEMGPSSSTIEAPMTINIPNCHSSTNPEENIKPSNLIQGTSVIFPVTVQRQTLPSGSVTEGVEAKGTTGGKLSSKRRRKAWSEEEDKQLQAAVQKCGEGNWATMSKGDDFPIKRSPTQLAQVGFIIVNGCELYGHSLFNHPIIWSLSTSCLPMALWIHSYKYMLMLLLSIKMVMDIVRKNREDNSLALGYYKRTPKVRTFHEECKRFGQKEGKPSWQCARWSILRKKDGTTNSGTNLTSSQFTAEQLATRHSLSLALDMPLKKLTAPGTIDPARTSLNASIMNPVQPFNTAEASTVQSSSGPPQLPSQQPALGPSASLANSIVPERTMLMSNTSADAAVRATAVAVGARIVSSADILSGQKATEDKSAGQIMPTGNSSMRLSASAGSVIHPKVLINPVVSPKAVATAPPPCTTAVKFVSPSGESTSNAHSSVVNNLPLEQVNPNQESKVSNSGVETKARNQVDEAPVTESIPNEEVLENKPVSQNSGEPDEQGVV 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0430 732 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 200 720 - -
Lele26g0430 732 ProSiteProfiles Myb-like domain profile. 310 355 IPR001005 -
Lele26g0430 732 MobiDBLite consensus disorder prediction 292 322 - -
Lele26g0430 732 MobiDBLite consensus disorder prediction 527 553 - -
Lele26g0430 732 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 310 339 IPR017930 -
Lele26g0430 732 SMART sant 314 366 IPR001005 -
Lele26g0430 732 MobiDBLite consensus disorder prediction 675 732 - -
Lele26g0430 732 MobiDBLite consensus disorder prediction 675 695 - -
Lele26g0430 732 SUPERFAMILY Homeodomain-like 313 357 IPR009057 -
Lele26g0430 732 CDD SANT_TRF 316 356 - -
Lele26g0430 732 Gene3D - 308 359 - -
Lele26g0430 732 Pfam Myb-like DNA-binding domain 315 356 IPR001005 -
Lele26g0430 732 MobiDBLite consensus disorder prediction 714 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0430 Lele-ChrLele26 2640453 2648260 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele26g0430 Myb_DNA-binding 8.7e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0430 26 2640453 2648260 Lele27g1666 27 22153571 22161032 hybridization
Lele26g0430 26 2640453 2648260 Lele28g0427 28 2639825 2648910 hybridization