Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0425 ATGGACAAAGCAGAAGAAGCTGAACGTTTGCTTGGGGTCGCGGAAAAGCTCTTGTCCGATCAGGATCTTACCGGCTCAAGAGAGTTTGCCAGTTTGGCCCAGGAAACGGAACCTCTTCTGGAGGGTTCCGACCTAATACTGGCCGTCGTCGACGTCCTCCTCGCCGCTGATAACAGATTAAACAACCACCACGATTGGTACGCCATTCTTCAAGTTGATCGCCGATCGGACGACATAGATCTCATCAAGAAGCAATATCGGAGGCTCGCACTTCTCCTCCACCCAGACAAGAACAGGTTCTCCTACGCTGATCATGCATTCAAGCTCGTCGCTGAGGCATGGGCTACGCTATCGGATCCCACCAAAAAGTCGCTCTACGACAAGGAGCTTGGTCCCTTCTCTACGGTTGATTTGAGCGCGCCCGGCTGGGCTCATCAAGAAAAATTGCCGGTTCGAAGAGCCGGAGCGGGGTCCAGTGGTGGTGGGAACCCGGGGTTTGATTTCAGGAACAATGGCACGGCCACTAGGGACGCTGTGGCCCATGAGAATTCACGACGGAGTCCGTCGACCTTCTGGACTGCGTGCCCGTACTGTTATTTGCTGTGCGAGTATGATAAGATTTACGAGGGATATTGTCTAAGGTGCCAGAACTGTGAGAGATCATTCCATGGGGTTTCGATCCCGACTTTGCCGCCTCTTGTGGCCGGCCAGGAGGCCTATTACTGTTGCTGGGGATTCTTTCCATTAACCTTAGCCACCGCTAATGCCGCCGGCAAAGAAGCCGCGACTCCTTCAGGATTTCCAAATTGGACGCCCATGGCATCTGAACCTGGCCGGCAATCAGAGAATGGTTGGGATAAAGCAGAACCCGTGGCGGCCACAAAGACGGCGAAGGCCGGGGGTGTTTCTAATGGGATATCTTTAGGTTCGGGATCTAGTGGTCGGAAGCGAGGAAGATCGAAGAAGGCCTCTGCGGAATCCTTTGTTGTCATAAACTAG 999 0.5365 MDKAEEAERLLGVAEKLLSDQDLTGSREFASLAQETEPLLEGSDLILAVVDVLLAADNRLNNHHDWYAILQVDRRSDDIDLIKKQYRRLALLLHPDKNRFSYADHAFKLVAEAWATLSDPTKKSLYDKELGPFSTVDLSAPGWAHQEKLPVRRAGAGSSGGGNPGFDFRNNGTATRDAVAHENSRRSPSTFWTACPYCYLLCEYDKIYEGYCLRCQNCERSFHGVSIPTLPPLVAGQEAYYCCWGFFPLTLATANAAGKEAATPSGFPNWTPMASEPGRQSENGWDKAEPVAATKTAKAGGVSNGISLGSGSSGRKRGRSKKASAESFVVIN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0425 332 MobiDBLite consensus disorder prediction 300 314 - -
Lele26g0425 332 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele26g0425 332 SMART dnaj_3 64 122 IPR001623 -
Lele26g0425 332 MobiDBLite consensus disorder prediction 296 332 - -
Lele26g0425 332 Gene3D DnaJ domain 54 135 IPR036869 -
Lele26g0425 332 ProSiteProfiles dnaJ domain profile. 65 130 IPR001623 -
Lele26g0425 332 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
Lele26g0425 332 CDD DnaJ 65 119 IPR001623 -
Lele26g0425 332 Pfam DnaJ domain 65 127 IPR001623 -
Lele26g0425 332 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele26g0425 332 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele26g0425 332 PRINTS DnaJ domain signature 67 85 IPR001623 -
Lele26g0425 332 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0425 Lele-ChrLele26 2604392 2605390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0425 6 321 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.619 5.18e-95 284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0425 26 2604392 2605390 Lele27g1673 27 22196959 22199308 hybridization
Lele26g0425 26 2604392 2605390 Lele28g0422 28 2608414 2611385 hybridization