Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0408 ATGGGAAAAGAATTTGGAACCTGGATGCCGCAGCTGCATTTTGATCGGCAATCACCCAATTTGAGTTCCTTTGGCGCTAGCCTTGACGTGGGGAAGCGAAATGATTCTGCGTGTATGAGCCCCGCTGGAATAAATATGATGCCTGAAAATTATACAATGCCACACTATGCACCCTCCATTCTACCACATTCGCAGTTAGGACAGTCTAATGAACCTTATGGTTGGTCCTACGGTTTACCTCAGTTTAGACAGGCATTCATGCCTGCTCCAAACTTCACTTGGGAGAGTAAGATCCCTGCTGGCCAGGAAAAAGGTATTAAGGAGGAAATTGCACCTGACAGGATACAGGGCTTCCCTAAGAAGCAGTTCATCGTTATTGACCAGACTGTCAATCAAACAACATTCGTATATAGTTCTGGGTTTGGAACTCCCATTGAGTGCCTTGCTTCTTGGCATTCAAAGCGGCATGGTCCTGACTATTTGAATGGGAATGAGCGTTCTTTTAGAAGAGATTTGAATAGTCTGAATGGACCCACTTTGACGGATAAAGTTGATAAAAATCAGGGAACTGAGGCCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCGCTACTTTACTCTGATAGTGACGGTTACTCCACTGAGGATGATGAAGTTACTAGCACAGGGCATTCGCCCAGTATAATGACCACTCATGATGACCAAGACTTCGTTTTGGGAAGCAATGAAGGAGTTGGTAGCTGCAATGAAGAAGTATGTAGCTCTGCTGGGAAAGCAAAGAAGCGGAAGCTGTCAGACGATAGAGCTTATGATGACCTACGGCTCATGGACAGTGCCAGTTCTCTGAATCTGAGTAGATCCTTAGATAATGGATATGATGCTGAATCAAGATGTTCTAGCGGCAGCAGTCAAGGATCAGACAACAAGAAGATGAGAAAAGAGAGGATAAGGGATGTTCTAAATGTTCTGCAAACCATAATTCCTGGTGGGAAAGAAAGGGATCCAATTGGGCTTCTTGATGAGGCGATATGTTGCCTGAAATCATTGAAACTCAAGGCTAGAGCTCTAGGGCTCCACGACTTGTAA 1092 0.446 MGKEFGTWMPQLHFDRQSPNLSSFGASLDVGKRNDSACMSPAGINMMPENYTMPHYAPSILPHSQLGQSNEPYGWSYGLPQFRQAFMPAPNFTWESKIPAGQEKGIKEEIAPDRIQGFPKKQFIVIDQTVNQTTFVYSSGFGTPIECLASWHSKRHGPDYLNGNERSFRRDLNSLNGPTLTDKVDKNQGTEAQSEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSIMTTHDDQDFVLGSNEGVGSCNEEVCSSAGKAKKRKLSDDRAYDDLRLMDSASSLNLSRSLDNGYDAESRCSSGSSQGSDNKKMRKERIRDVLNVLQTIIPGGKERDPIGLLDEAICCLKSLKLKARALGLHDL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0408 363 MobiDBLite consensus disorder prediction 173 187 - -
Lele26g0408 363 MobiDBLite consensus disorder prediction 218 234 - -
Lele26g0408 363 MobiDBLite consensus disorder prediction 173 199 - -
Lele26g0408 363 PANTHER TRANSCRIPTION FACTOR BHLH145 8 361 IPR037546 -
Lele26g0408 363 MobiDBLite consensus disorder prediction 211 234 - -
Lele26g0408 363 MobiDBLite consensus disorder prediction 293 308 - -
Lele26g0408 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 351 IPR011598 GO:0046983
Lele26g0408 363 MobiDBLite consensus disorder prediction 293 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0408 Lele-ChrLele26 2474592 2475683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0408 74 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.203 1.97e-24 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0408 26 2474592 2475683 Lele27g1689 27 22302861 22303949 hybridization
Lele26g0408 26 2474592 2475683 Lele28g0405 28 2477292 2478693 hybridization