Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0361 ATGGCAATAACACACAGTTTAAAGTTTGAGCCTTTGCCAAGTACCACCGCTGACGATCTCTACCCTCTTTTTGACAAGTACGGCAAGGTTGTCGATGTCTTCATCCCCAGAGACCGAAGGACTGGCGAATCACGAGGCTTCGCTTTTGTTCGTTATAAGTATGCCGACGAGGCTCAGAAGGCAGTAGATAAGCTTGATGGAAGAGTGGTTGATGGAAGAGAAATTATGGTTCAATTCGCAAAATACGGACCTAATGCTGAGAAAATTTATGACCCAGTAACCTGTTCTGCTTACTGGGCAATGCCAATATACATTTTTCTTCTTAGGCTTTTGAGCTGGACTCAGTTACAGTTTATACGTTATAAAGTGTTTTCTGCTTCCAATATCCTGCCTAATCTAGAAAGTTGTCAGCATAGGGATGAATATAGAGACAGGGACTACAGGAGGAGAAGTCGCAGTAGAAGTAGGGAAAGATATGATCGTGACAAGTACCGTGAAAGGGATAGGGATTATCGTCGCCGGAGTAGGAGCCGCAGTGCAAGTCTTGATCGGCATAAAGATAGTAGGAGAGGAAGAGATGATGAGGAGAGAAGAACTCGAAGCATATCAGTGGATGGTGCATCACCTGCTCGGCATGGCTCCAGTCCTCGTAGAAGTCCATCTCCACACAGGAGGTCATCTCGAGATGAGCTGCACGATGAACAGAATAGTCGTGAGCAATCACCTGCTCAGAAAGATGTTTCACCACATGATCGTCCTATTGATTCTCGAAGCCCATCTCACAAATCTGATGCTGATGTAAGATTCTGAATGATGGAGTGGCCACTTTTCTCAGGGATCTATTGGTGGCCTTATTATGACTTCTGTCATCAGTTGTCTGGATGA 885 0.4508 MAITHSLKFEPLPSTTADDLYPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDKLDGRVVDGREIMVQFAKYGPNAEKIYDPVTCSAYWAMPIYIFLLRLLSWTQLQFIRYKVFSASNILPNLESCQHRDEYRDRDYRRRSRSRSRERYDRDKYRERDRDYRRRSRSRSASLDRHKDSRRGRDDEERRTRSISVDGASPARHGSSPRRSPSPHRRSSRDELHDEQNSREQSPAQKDVSPHDRPIDSRSPSHKSDADVRFXMMEWPLFSGIYWWPYYDFCHQLSG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0361 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 75 IPR000504 GO:0003723
Lele26g0361 294 SMART rrm1_1 6 78 IPR000504 GO:0003723
Lele26g0361 294 MobiDBLite consensus disorder prediction 170 202 - -
Lele26g0361 294 Gene3D - 12 88 IPR012677 -
Lele26g0361 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 82 IPR000504 GO:0003723
Lele26g0361 294 MobiDBLite consensus disorder prediction 170 262 - -
Lele26g0361 294 SUPERFAMILY RNA-binding domain, RBD 13 84 IPR035979 GO:0003676
Lele26g0361 294 MobiDBLite consensus disorder prediction 222 262 - -
Lele26g0361 294 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0361 Lele-ChrLele26 2178426 2181388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0361 19 80 Eukaryotic Initiation Factors Gene Family AT3G11400 40.323 9.14e-09 53.9