Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele26g0350 | ATGGATTTCTACGGTGGCAGACAACTTCATTCAGATCCTTTCAGGGGTGAGTTGATGGAAGTACTTGAACCTTTTATGAAATGTCCTTACACAACTCCTTCTCCCTCCGCAGCCTCATCCCCTTGTTCAAATTCCTCCCTACCTTCTACATCTTACTCTCCTTCTCAATCAGTCCCTTCACAGCCCAGTTTTCTGGCAGACGGTTGCTCCACATCGATGACTCCTATATTTAACGATGGGTTATCGAACAGCCTCAACACCATCGGCTTCGGGCAACCGAGCTCTGTTCTCGGGCTCAACAACCTAACCCCATCTCAGATTTACCAGATCCAATCTCAGATCCAGCTCCAGAACCATCAAAACCTTTGCTGGCAGCAAAATAGAGCCTCTGCCACCCTTGGCTTCTTGAGTCCCAAACCTATTCCCATGAAGCATGCGGGTGTGCCTCCCAAACCCACTAAGCTTTACCGAGGTGTCAGGCAGCGTCACTGGGGGAAGTGGGTTGCCGAGATCAGACTCCCTAAGAACCGCACACGACTCTGGCTCGGCACCTTCGACACCGCCGAGGAAGCCGCCCTAGCCTATGACAAGGCCGCTTACAAGCTCAGAGGTGACTTTGCCAGGCTCAACTTTCCCAACCTGCGACACCAAGGCTCTTGTGTCGGCGGCGAATTCGGAGAGTACAAGCCACTCCATTCATCTGTGGACGCCAAGCTTCAAGCGATCTGCGAAAGCTTGGCCGATCTTCAGAAACAGGGGAAGTCAGCGAAGCCGACGGGCTCATCCAAGAGGTCCGGGGGGCGGTCAAAATCGGGTTCGAAAGATGCTCAGCCGGTGGCCAGCGAAACCGATGTGAAGGCGGAAAGCTCCTCGTCACCGGCGATGACGGAGAGCGAGGGATCCGGGGGTTCTTCTCCCCTGTCGGATCTGACTTTCGTGGACGTGAGCGAGCCACAGTGGGACGGGGCTGTGGATAATCTGAATCTGCAGAAGTACCCTTCTTATGAGATTGATTGGGCATCTCTGTGA | 1029 | 0.5394 | MDFYGGRQLHSDPFRGELMEVLEPFMKCPYTTPSPSAASSPCSNSSLPSTSYSPSQSVPSQPSFLADGCSTSMTPIFNDGLSNSLNTIGFGQPSSVLGLNNLTPSQIYQIQSQIQLQNHQNLCWQQNRASATLGFLSPKPIPMKHAGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSCVGGEFGEYKPLHSSVDAKLQAICESLADLQKQGKSAKPTGSSKRSGGRSKSGSKDAQPVASETDVKAESSSSPAMTESEGSGGSSPLSDLTFVDVSEPQWDGAVDNLNLQKYPSYEIDWASL | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele26g0350 | 342 | SMART | rav1_2 | 155 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | Gene3D | AP2/ERF domain | 155 | 213 | IPR036955 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | MobiDBLite | consensus disorder prediction | 252 | 312 | - | - | |
Lele26g0350 | 342 | Pfam | AP2 domain | 156 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | MobiDBLite | consensus disorder prediction | 250 | 314 | - | - | |
Lele26g0350 | 342 | CDD | AP2 | 154 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | MobiDBLite | consensus disorder prediction | 39 | 59 | - | - | |
Lele26g0350 | 342 | ProSiteProfiles | AP2/ERF domain profile. | 155 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 7 | 342 | - | - | |
Lele26g0350 | 342 | FunFam | Ethylene-responsive transcription factor 2 | 154 | 213 | - | - | |
Lele26g0350 | 342 | SUPERFAMILY | DNA-binding domain | 155 | 213 | IPR016177 | GO:0003677 | |
Lele26g0350 | 342 | PRINTS | Ethylene responsive element binding protein signature | 178 | 194 | IPR001471 | GO:0003700|GO:0006355 | |
Lele26g0350 | 342 | PRINTS | Ethylene responsive element binding protein signature | 156 | 167 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele26g0350 | Lele-ChrLele26 | 2107977 | 2109005 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele26g0350 | 16 | 342 | AP2-EREBP Transcription Factor Family | AT1G78080 | 55.362 | 3.77e-97 | 289 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Lele26g0350 | AP2 | 7.7e-15 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele02g0359 | 02 | 2081498 | 2084832 | Lele26g0350 | 26 | 2107977 | 2109005 | CCT | |
Lele26g0350 | 26 | 2107977 | 2109005 | Lele27g1751 | 27 | 22718103 | 22719538 | hybridization | |
Lele26g0350 | 26 | 2107977 | 2109005 | Lele28g0349 | 28 | 2126257 | 2127285 | hybridization |