Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0343 ATGAGAGAGCAGGGCAACCTACATGTTGAGAACATTGGTCAGGCAGAGAGGTCCCAGTGGATATTGAATTCACCCAGCCCGCCACCTCTCTGGACTAAGCTGTTCAATCTAAAGGAGGCCTTGCTTCGGGGAAACAGCATCTCTTCTTCATCCAAGAACAAAGTTTTCCGTAGACAAGTTGCTTCCTTCTTTCTCAACTTATTCCCAATCCTTAGCTGGTTAAAAGGATACAAAGCCTCGAAGTTTAAAGATGATCTGTTAGCTGGTTTAACTCTTGCCAGCCTCTGCATACCTCAGAGCATAGGATATGCTACTCTGGCAAGGCTTGATCCTCAATATGGCCTGTATACAAGTGTAGTTCCTCCTCTTATCTATGCTGTAATGGGGAGTTCAAGAGAAATTGCAATTGGGCCCGTGGCCGTAGTATCATTGCTGCTATCTTCCCTGCTCTCGCAGGTGGAAGATCCCGTTGCTAACCCCGATGCCTATAGAAACCTTACCTTCACGGTGACCTTCTTTGCCGGAATCTTTCAAGCGACATTTGGAATTTTTAGGCTGGGTTTTCTGGTTGATTTTCTTTCGCATGCTGCGTTGGTTGGATTCATGGCAGGAGCAGCGATCATGATTGGTCTTCAGCAACTCAAGGGGCTTCTGGGAATTACACATTTTACCAACAAAACTGATGCAGTTTCTGTTTTGGAGTCTGTTTATAAGTCACTCCATCATCAGCTTACTTCAGGTTCTGCAGATAAAGAATCTATAGGAGTTGGTCGATCTTTCGCTGCCATTAAAGGGTACAATCTTGATGGGAACAAAGAAATGTTAGCAATGGGGTTCACCAACATTGCAGGCTCTCTAACTTCATGCTATGTGGCAACTGGATCTTTCTCAAGGACTGCGGTGAATTTCAGTGCAGGATGTCAAACGGCGGTATCAAACATTGTGATGGCAGTGACGGTGCTTGTGTCGCTAGAATTACTTACAAGGCTGTTATACTACACACCAGTGGCTATACTTGCTTCCATCATTATTTCGGCACTTCCAGGACTTATTGACATAAACGAAGCTTACCATATATGGAAGGTTGACAAATTCGACTTTCTTGCCTGCATCGGTGCTTTCCTCGGCGTCTTGTTTAAATCAGTAGAGGTTGGGCTTCTTGTTGCGGTAAGTTCTTCACCATTTTCATCCCTTTCACATTTAACAGCGTCCCCATTATTTGGAATAATGGAAAGGGTGGCAAAAGAAGATGAGAGTGGTGCACAAGAAAGGGTGAAAGCAGTGATCTTGGATATGACGAACCTGATGAATGTTGATACTTCTGCAATAATTGCACTGGAGGAACTGCACAAGAAGTTTCAATCCCGTGGCATGGAATTAGCTATGGTGAACCCAAGGTGGCAAGTCATTCACAAGCTCAAAGAGGCGCAATTTGTGTATAAGATCGGGAAAGAGAGGGTTTTTCTTACGGTTGGAGAAGCCGTTGACGCTTATGAGTCTAGTAAATTGGTGGCGCCTTGA 1521 0.4464 MREQGNLHVENIGQAERSQWILNSPSPPPLWTKLFNLKEALLRGNSISSSSKNKVFRRQVASFFLNLFPILSWLKGYKASKFKDDLLAGLTLASLCIPQSIGYATLARLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLLSQVEDPVANPDAYRNLTFTVTFFAGIFQATFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDAVSVLESVYKSLHHQLTSGSADKESIGVGRSFAAIKGYNLDGNKEMLAMGFTNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVLVSLELLTRLLYYTPVAILASIIISALPGLIDINEAYHIWKVDKFDFLACIGAFLGVLFKSVEVGLLVAVSSSPFSSLSHLTASPLFGIMERVAKEDESGAQERVKAVILDMTNLMNVDTSAIIALEELHKKFQSRGMELAMVNPRWQVIHKLKEAQFVYKIGKERVFLTVGEAVDAYESSKLVAP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0343 506 ProSiteProfiles STAS domain profile. 409 498 IPR002645 -
Lele26g0343 506 CDD STAS_SulP_like_sulfate_transporter 404 491 - -
Lele26g0343 506 Pfam Sulfate permease family 82 242 IPR011547 GO:0016020
Lele26g0343 506 Pfam Sulfate permease family 252 371 IPR011547 GO:0016020
Lele26g0343 506 PANTHER SULFATE TRANSPORTER 414 498 IPR001902 GO:0016020|GO:0055085
Lele26g0343 506 SUPERFAMILY SpoIIaa-like 421 498 IPR036513 -
Lele26g0343 506 Pfam STAS domain 419 494 IPR002645 -
Lele26g0343 506 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Lele26g0343 506 Gene3D STAS domain 396 502 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0343 Lele-ChrLele26 2046318 2049163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0343 215 502 Inorganic Solute Cotransporters AT1G77990 46.398 7.12e-92 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0343 26 2046318 2049163 Lele27g1758 27 22752737 22755834 hybridization
Lele26g0343 26 2046318 2049163 Lele28g0342 28 2073394 2076458 hybridization