Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0340 ATGTATTCACCCGTTACATCAATCTACCAGACCAAGAAAGAGATGGAGCAACCCTACCGCAGGAATCTTGATCAGAACAAAGAGTATCTGTTGAGGACCCTTCAACAACTGAAAAGTGAGAACGACATAGCTCTTCAGTTGGCCAAGTTCGATCTGCAACAAGAAGTGAGCAGGTTACAGCAACAGCTTCAAATAGCGGAAGAACAGATACGGATATTTGAACCGGAGCCGTTAAAGATGACGTCAACGGGGGAGCTGGAATCGAGCGAGAAGCATCTGATGGATACGCTGACACGTGTAATGCAAAGGAAGGAATATCTGATGAGCGAACACGTACCGTCGTACGACCCATCGGGGATGACTTCGCTGGAGAATGTGGGATGGTTAGGGGAGGGCGGCGACAACCATTCCCACATATTTGACGCTTCGGTGTCTATGGATCCACTGACGTCCGGCGTGTACGAGGCATTCTCGCAGGGAGGCACCAGCTCCACCGGGGAGTGCCACGTGGCCAACGGAAGCGCCGATGCAAATCTGCAGGCCTGGCCCCAAGGCTACACTCTTTATCCGCCCATCCAGCAGGAGATGCAGCAGCAGCAGCTCAACAATCTGCCCTCCATCCCCACCCACACTCCACAGTGA 642 0.528 MYSPVTSIYQTKKEMEQPYRRNLDQNKEYLLRTLQQLKSENDIALQLAKFDLQQEVSRLQQQLQIAEEQIRIFEPEPLKMTSTGELESSEKHLMDTLTRVMQRKEYLMSEHVPSYDPSGMTSLENVGWLGEGGDNHSHIFDASVSMDPLTSGVYEAFSQGGTSSTGECHVANGSADANLQAWPQGYTLYPPIQQEMQQQQLNNLPSIPTHTPQ 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0340 213 Coils Coil 49 69 - -
Lele26g0340 213 Coils Coil 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0340 Lele-ChrLele26 2031169 2032701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0340 20 212 Type I MADS-box Gene Family AT1G22130 43.318 4.12e-43 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0340 26 2031169 2032701 Lele01g0372 01 2161731 2164339 CCT
Lele26g0340 26 2031169 2032701 Lele02g0367 02 2131943 2136831 CCT
Lele26g0340 26 2031169 2032701 Lele03g0378 03 2181580 2184913 CCT
Lele26g0340 26 2031169 2032701 Lele04g0375 04 2219180 2222284 CCT
Lele26g0340 26 2031169 2032701 Lele27g1760 27 22768952 22771602 hybridization