Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0331 ATGCCCTGTCAGACGATGGCTTCTATCTGCATCCCCCGCGCTGTTGCACAGCCCGCCACAACTTTTCCCAGCTGGAAGTCTTTCAGAGAGAGGAAAACTGATTTGCAAACAGGAATCCCTCGCAGTGTTCACATGGAGAACCTGCAGAACGAATATTTGTTTCCTGAGATATTCATGCGGGAAACTGAACATGCCCGGAAGAATCCACATGCGAGAGTAATCAGACTTGGTATTGGTGACACCACAGAACCAATTCCAAACATCATAACTTCTGCTATGGTTGAGAAAACACTTGCTCTGTCAACAGTTAAAGGTTACAGTGGATATGGACCAGAGCAAGGAAACGGGGAATTAAGGAAGGCAATAGCTGAAAGATTTTACCGGGGTTCACTCGTGAAGGAGAATGAGGTTTTTGTATCCGACGGCGCACAGTGCGATATTTCTCGCATTCAGATGCTTCTAGCATCTAGCTTGACGGTGGCTGTGCAGGACCCAACTTTTCCGGCGTATGTAGATTCAAGTGTAATTGTGGGCAGAGCAGGCAGGTTCCAAGCAGAAACACAGAAGTACAGAAACATAGTGTACATGAAGTGTGTGCCGGAGAATAATTTCTTCCCAGATTTATCAGCTACTCCAAGGGCAGATGTTATTTTCTTCTGTTCTCCAAATAATCCGACCGGTAATGCTGCGACTCGGCAGCAGTTGAAGCAACTAGTGGATTTTGCAAAAGCAAATGGATCCATAATCATATATGACTCAGCATATGCTGCTTTTATATCTGATGAAAGCCCAAGATCAATATTTGAAATCCCAGGAGCCAAAGAGGTGGCAATTGAAATATCATCATTCTCCAAATTTGCTGGTTTCACTGGGGTCCGCCTAGGTTGGACCGTTGTCCCCGAGAAATTATTGTACTCCAATGGATATCCTGTGATCAAGGATTATAATCGCCTTGTATGCACCAGTTTCAATGGTGCTTCAAATATTGTCCAAGCTGGTGGACTCGCCTGCCTTTCTGATGAAGGTTTTCCGGCACTGGGTAAAGCTGTGAATTATTACAGGGAGAATGCGAAAATTCTGGTGGACACGTTTGAATCGCTTGGGCTGAAGGTGTATGGAGGCAAAAACGCACCTTACGTATGGGTACATTTTCCGGGGAGAAAATCGTGGGACGTGTTCAACAAGATTCTGCAGAGAGCGGACATAGTCACCGTCCCGGGGATAGGATTTGGACCGGGCGGCGAGGGGTTTATTAGAGTCAGCGCATTTGGTCGTAGAGACAGTATATTGGAAGCTTCAATGAGGCTGCGACAATTTCTTTAG 1323 0.4596 MPCQTMASICIPRAVAQPATTFPSWKSFRERKTDLQTGIPRSVHMENLQNEYLFPEIFMRETEHARKNPHARVIRLGIGDTTEPIPNIITSAMVEKTLALSTVKGYSGYGPEQGNGELRKAIAERFYRGSLVKENEVFVSDGAQCDISRIQMLLASSLTVAVQDPTFPAYVDSSVIVGRAGRFQAETQKYRNIVYMKCVPENNFFPDLSATPRADVIFFCSPNNPTGNAATRQQLKQLVDFAKANGSIIIYDSAYAAFISDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEKLLYSNGYPVIKDYNRLVCTSFNGASNIVQAGGLACLSDEGFPALGKAVNYYRENAKILVDTFESLGLKVYGGKNAPYVWVHFPGRKSWDVFNKILQRADIVTVPGIGFGPGGEGFIRVSAFGRRDSILEASMRLRQFL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0331 440 FunFam LL-diaminopimelate aminotransferase, chloroplastic 83 340 - -
Lele26g0331 440 Hamap LL-diaminopimelate aminotransferase [dapL]. 40 439 IPR019942 GO:0008483
Lele26g0331 440 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 42 438 IPR019942 GO:0008483
Lele26g0331 440 Gene3D - 83 340 IPR015421 GO:0003824
Lele26g0331 440 Gene3D Aspartate Aminotransferase, domain 1 53 436 IPR015422 GO:0003824
Lele26g0331 440 Pfam Aminotransferase class I and II 73 422 IPR004839 GO:0009058|GO:0030170
Lele26g0331 440 PANTHER AMINOTRANSFERASE 27 439 IPR019942 GO:0008483
Lele26g0331 440 CDD AAT_like 74 438 - -
Lele26g0331 440 SUPERFAMILY PLP-dependent transferases 51 436 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0331 Lele-ChrLele26 1988675 1991670 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0331 26 1988675 1991670 Lele01g0366 01 2118531 2121885 CCT
Lele26g0331 26 1988675 1991670 Lele03g0371 03 2129294 2132641 CCT
Lele26g0331 26 1988675 1991670 Lele04g0367 04 2173145 2176492 CCT
Lele26g0331 26 1988675 1991670 Lele27g1767 27 22810456 22813456 hybridization
Lele26g0331 26 1988675 1991670 Lele28g0333 28 2011177 2014160 hybridization