Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0310 ATGAAGCCCATTGAGCCCACTATCTCTGGCATTACCGCCAAACGGGACAATTCAAAAGCCGTGTCTGTCCGTCTACGATCCCAGAAGCGGGCACTCGACAATTTCCCGAAATGCCTTGGAGATTACTCCATGGACTGGAAGGCTAACCTTCCGGCCTCACCCCCGACTGCCAAGAACCTGTTCCGCCCAACCAATCCCGATAGTACATCGTCTTCCTCATCCTCCCTCTCTTCTTCCTCACCGCCGGACTTCCTCCGGCATGTTCAAGCCGCCTTCAAGCGTCATCGTCCTCTCGGTACAGTGCAATCAAATATAAGACCAAGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTTCACTGAAAGTCGGTCCAAATGTAGATGATAAGAAGTCCCAGGAGATATCTTTAAGCAAGGTTCAGTCGGAGATGGAGTCATGCGCACATAGAAATAGCACGACTTCGATGATTGGAGAAGGTCAAGAGGACGTATTAATCACGCCTCCTTCTGTTTCTGGTAGTTGCTACAATGCACTTGACAAAGGATGCAATCCATTCAATGCACAAGAATGTCATTTAAATGTAATGACTAATTGTAAAGACAAGGTTGTCATGCATTCTTTGCCAGTGGAATCTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCTTAGTAGGAAACAACACTACTGCCCAGGGGGCCGATGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCACCCAGCCGGAAGAATTTAATTTATTCAATCAAGATCCAAAGCACCAAAGTGTTTTGCAGGCAGAGTCTGAACTAACTTTGAGATCCGATGGAGGATTAAATTCCCAGTTGGCGAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGTCAGCCAGCTAATCAATCTTCAGTAGTGGGACCTTCATGTGCTACGACAACATCTGTCCATTCATCTTCAGCTCCTATGCTAAATTCAACAACCCATTATTCTCATTCACATATTGATAGTGGGTCACATGCAGCGGCAGAACCTTTGAGGGAAAATAATGTTAGTAGTCATCCGATAACTCAAGGAGTTGTGAAATCATCTAGCACTTACCTAAAAGAGACCAATAAAATGTCAGTGGATCAAGCAGCAGTTGCATCTAGTTCTGCCACGACTACAGGGTTACCATCTAAGGATGGTGTCCCATGTAAGGAGCAGCAAGGCATCATGCTAAAGGAAAGTAACATTTCTAAAACCACTCGTGATGATAAGCCATCTAAGGGGAAAGAATATGCAGATGTTACCAACTTACAACCCCAGGCTCCAATGTCTAGGACTTCATTTTCAGATGTTAGGTTGGACTCATCTAAGTCAGAAAAACAAGAGAAGGCAGTAAGTAGTAAAGGCACATCAACTACTCGGAAAAGGGCCTATGACCCTGATATGTTTTTCAAAGTAAATGGCAAGCTGTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTAAAGGGTCGTGATTATGCCACTGCATATGGGTTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGAATAATGTTATTCAGCTGATTGACTATGAAGTGACTGACAAGACTTTGCTTGAAGAAGTCCTGAGAGGCTCCTTGAGTAGTAAAGACAGCCGAGTCAAGGATGATGGATATATATACATGGTTCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGACACAACCAGACCATAGATGAGAATTGGCTTCGATTTTATTGGCAGCAAATACTTCAAGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTGAAGCCAGCTAATTTTCTTCTCGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGTACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGACCATCGGATATTTGGTCTCTGGGCTGCATTCTCTATCAAATGGTATATGGCAGGACGCCATTTTCGGAGTACAAGACGTTCTGGGCCAAATTCAAGGTCATAACACATCCAAATCATGAGATTACGTATGAGCCCGTTTCAAATCCATGGCTTCTGGATCTCATGAAGCGGTGTCTAGCATGGGACCGTAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACATCCGTTTCTTGTTCCGCCAACTCCGCCACAGCCTTCCCTGTCCCAAGACCAAAGCTTTCAATTTCTACAATTTATAGCTGAAACTTGTGTAGATGACCCAGAAGCTTCAAAGCTCTGTTGTCAGCTCCAGCAGGTGGTTAGCGATCCACTCAAGTTAATAACTCCCCACTCTCTTAGCTCACGAGATCAACAATGTAAACTATTGTCCCAATTGTCAGAACTTTGCCTCCAGCTGCATGAGCGACTAAAAACTTAG 2655 0.4362 MKPIEPTISGITAKRDNSKAVSVRLRSQKRALDNFPKCLGDYSMDWKANLPASPPTAKNLFRPTNPDSTSSSSSSLSSSSPPDFLRHVQAAFKRHRPLGTVQSNIRPRRMMVPQREVSRNSSLKVGPNVDDKKSQEISLSKVQSEMESCAHRNSTTSMIGEGQEDVLITPPSVSGSCYNALDKGCNPFNAQECHLNVMTNCKDKVVMHSLPVESQNVDGQKKVQFLVGNNTTAQGADDGKATELENLSSHMGSLALTEMEWAASTQPEEFNLFNQDPKHQSVLQAESELTLRSDGGLNSQLAKRTTAIQDHLQQFRNFLSQPANQSSVVGPSCATTTSVHSSSAPMLNSTTHYSHSHIDSGSHAAAEPLRENNVSSHPITQGVVKSSSTYLKETNKMSVDQAAVASSSATTTGLPSKDGVPCKEQQGIMLKESNISKTTRDDKPSKGKEYADVTNLQPQAPMSRTSFSDVRLDSSKSEKQEKAVSSKGTSTTRKRAYDPDMFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNVIQLIDYEVTDKTLLEEVLRGSLSSKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGHNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITHPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPQPSLSQDQSFQFLQFIAETCVDDPEASKLCCQLQQVVSDPLKLITPHSLSSRDQQCKLLSQLSELCLQLHERLKT 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0310 884 MobiDBLite consensus disorder prediction 323 358 - -
Lele26g0310 884 FunFam serine/threonine-protein kinase mph1 isoform X1 624 806 - -
Lele26g0310 884 MobiDBLite consensus disorder prediction 58 83 - -
Lele26g0310 884 MobiDBLite consensus disorder prediction 113 135 - -
Lele26g0310 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Lele26g0310 884 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Lele26g0310 884 MobiDBLite consensus disorder prediction 456 470 - -
Lele26g0310 884 Gene3D Phosphorylase Kinase; domain 1 503 588 - -
Lele26g0310 884 MobiDBLite consensus disorder prediction 55 83 - -
Lele26g0310 884 SMART serkin_6 510 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0310 884 MobiDBLite consensus disorder prediction 407 493 - -
Lele26g0310 884 MobiDBLite consensus disorder prediction 435 449 - -
Lele26g0310 884 Pfam Protein kinase domain 510 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0310 884 Gene3D Transferase(Phosphotransferase) domain 1 624 806 - -
Lele26g0310 884 CDD PKc_Mps1 508 803 - -
Lele26g0310 884 PANTHER MIXED LINEAGE PROTEIN KINASE 49 833 - -
Lele26g0310 884 SUPERFAMILY Protein kinase-like (PK-like) 505 815 IPR011009 -
Lele26g0310 884 FunFam serine/threonine-protein kinase mph1 isoform X2 503 590 - -
Lele26g0310 884 ProSiteProfiles Protein kinase domain profile. 510 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0310 884 MobiDBLite consensus disorder prediction 323 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0310 Lele-ChrLele26 1826054 1830826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0310 516 804 MAP Kinase Kinase Kinase AT4G08470 28.767 2.37e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lele26g0310 Pkinase 1.2e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0310 26 1826054 1830826 Lele27g1786 27 22947230 22952329 hybridization
Lele26g0310 26 1826054 1830826 Lele28g0314 28 1862685 1867407 hybridization