Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0309 ATGAGCAAACCCAGAATCCATAGGAAACCCACCAAGCAAGCCATTGCCGACCAGAACCAAAAGCCGCAGAAATCAGAGAAACAGCCCTCTTGGGCAGTGGTGAGAGGCTTATTGACTTGTAGAAATGTTCAAACCCAGCCGCAGCAAATTCCTGAAGGGAAACAACAACCAAAGAAGAAACAAGAACAGCGAAAGTTGCAGGAGGAAAGAATCCCAGAAGATCAGAACGGCAAGAAATGCAAGAAGATGAAATGTTCAGGCTTGCTTTGTAATAACACCAATATTATGGCAAAGCCTGAAACGGGATGCCCGGATGCGCACGGCAAAAAGGACTCACTGTTTGCATGTAGCAGCAGCAAGAAGGATTCTTCAAGCAGATCCATGAGAGCTCCTCCACGAGAACCTAACGCTGCCGTTTTAGCATCTCCTTCTTCATTGTCAGCATCTTCTAGTTCTTCTGTTAGCGGGTCTTTCAAGGGAATGCCCTTCAGGAGACTGTCTGGTTGTTATGAGTGCCGAATGGTGGTTGACCCTGTTCTGGGTTTCACCAGAGACCCTTCCCTTCGGAGCAGCATTTGTCCATGCCCAGACTGTGGTGAGATCTTCACGAAAGCTGAAAGCTTGGAGCTTCATCAGGCGGTTAACCATGCAGTATCCGAACTGGGCCCCGAAGATACGAGCAAGAATATAGTAGAAATCATATTCCATTCAAGCTGGCTGAAGAAACAGTCCCCAGTCTGCAAAATAGATCGCATCCTCAAAGTCCATAACACCCAAAAGACGATTTCCAGATTCGAAGAATACAGAGACTCCATAAAAGCCGAAGCCAGAAACCTCCCCAAGAAACACCCACGCTGCATAGCAGACGGCAACGAGCTGCTCAGGTTTCACGCTACCACCTTCGTCTGCTCTCTGGGCCTCAACGGTTCGGCCAACCTCAACTCAATACCGCAGTGCAACGTTTGCAACATAATCAAGAACGGGTTTAAGGTGGCCGCTGAAACAAACGGAGGAAACGACGGGAAGGGAATATTGACGACGGCGACGAGTGGGAAGGCCCACGACAAAGCGGTGGTTTCAGCGGACGATAAAAACGACACAAGGGCGATGCTGGTTTGTCGGGTAATAGCTGGCAGGGTGAAGAAGAACATGGAAGGAAGCATGGAGGAATATGATTCGATGGGAGGGGGTGTCGGGGCGTATTCGAATTTGGACGAGTTGTATGTGTTCAATCCAAGAGCTATATTGCCTTGTTTTGTGGTGATCTACAGAGGAGACCAAAATGCAGTGGATGCAATGATTGAGAATGAAAAGAAAGCACGAGAAAGAGTTATTCTATGGATGAGGATGGCGCAGACTAAACACCCAGCGCAGCATACATGTTGGAGACCTTACCCAGCAAAGACTCGGTCTTGTGTAGCCAACAGGCAACAGACTCTGCTCAAGAACATCAAGTTTTTACCTTTGCTCGCAAAGAGAGGAAAAGCTAAAACCACAACCTCTTTACCTGGCATTCTTTCAAACAATCTTAGTGCATTGTCAATATCACCCTGTTTTGCATATAGATCAAATTCCAGAGCGCCAACCCACCAAAACTCGAGTCACTGGACAGCTCATAGAAGATGGGTGTTCACTTGGGGGGACGAGGAGTTCAAATTTTACACTCATCAAGGATTGGAATTTGAGAAAGCAATTGGGAAGCGTTCTGAGACCTAA 1716 0.4755 MSKPRIHRKPTKQAIADQNQKPQKSEKQPSWAVVRGLLTCRNVQTQPQQIPEGKQQPKKKQEQRKLQEERIPEDQNGKKCKKMKCSGLLCNNTNIMAKPETGCPDAHGKKDSLFACSSSKKDSSSRSMRAPPREPNAAVLASPSSLSASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICPCPDCGEIFTKAESLELHQAVNHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISRFEEYRDSIKAEARNLPKKHPRCIADGNELLRFHATTFVCSLGLNGSANLNSIPQCNVCNIIKNGFKVAAETNGGNDGKGILTTATSGKAHDKAVVSADDKNDTRAMLVCRVIAGRVKKNMEGSMEEYDSMGGGVGAYSNLDELYVFNPRAILPCFVVIYRGDQNAVDAMIENEKKARERVILWMRMAQTKHPAQHTCWRPYPAKTRSCVANRQQTLLKNIKFLPLLAKRGKAKTTTSLPGILSNNLSALSISPCFAYRSNSRAPTHQNSSHWTAHRRWVFTWGDEEFKFYTHQGLEFEKAIGKRSET 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0309 571 Gene3D - 217 424 - -
Lele26g0309 571 SUPERFAMILY ADP-ribosylation 218 445 - -
Lele26g0309 571 MobiDBLite consensus disorder prediction 140 156 - -
Lele26g0309 571 MobiDBLite consensus disorder prediction 1 30 - -
Lele26g0309 571 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 81 423 - -
Lele26g0309 571 MobiDBLite consensus disorder prediction 43 79 - -
Lele26g0309 571 ProSitePatterns Zinc finger C2H2 type domain signature. 193 216 IPR013087 -
Lele26g0309 571 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 221 IPR013087 -
Lele26g0309 571 MobiDBLite consensus disorder prediction 55 79 - -
Lele26g0309 571 MobiDBLite consensus disorder prediction 13 27 - -
Lele26g0309 571 MobiDBLite consensus disorder prediction 114 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0309 Lele-ChrLele26 1819421 1822718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0309 158 424 C2H2 Transcription Factor Family AT1G75710 53.925 1.26e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele26g0309 None None None