Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0299 ATGTCTTTGAGCCCTCCTCGCGCCAGAACAACCTATCAGCTTTACTGGTGCTTCCGCTGTAATCGACTGGTCGCGCTTGCCCCCACCTCCCCCTCCGACATTATCTGCCCTCGTTGTTTTCAACACTTCCTCTGTGAATTCAACCTCCCAAGACCCACGCTCCTCGCCGGTTTCACCAATCCCCGTCCTTCCCCTGAAGCGCGTTTGCTTGATGCCCTTTCTCTCGTGCTTGACCAACCCGTCCGCCGCTTCGGCAGCCGCTTCTTCGATCCTGAATATGAGCATCCACACTTTGCCAGGATTCCGGGGAGACCTCACGAATATGAAGGCCGAACTCGTGAGAACCCACGTGTTGAAATTCCGGTTCGTCGCATACGACATTCTCGACATCTTAGTTTTGATGCCGGAGCTGGTGGTTTCGATCCAGAACCAGAAACCCAACCTCGTCCTCGGAGTCGGGTTATTGTTCGACCTGTCGATCGTTCCAACTCATTCGAACGGGTTCCTCGTCGACAGGATTCAATCCCACGACGGGTTGATCCGAGAGACTACTTTTTCGGGCCGGGGCTCAACGAACTGATTGAACAACTGACGGAAAATGACCGGCAAGGCCCACCTCCAGCGCCGGACAGAGCCATCGAAGCAATTCCGACCGTGAAAATAGTGGAGACCCATTTGAAGGAGAACCCTCATTGCCCGGTCTGCCAGGAGGAGTTTGAAGTGGGTGGTGAGGCGAAGGAGTTAGCCTGCAAGCATATATACCATTCTGATTGCATCGTGCCATGGTTAAAGCTCCACAATTCTTGCCCCGTTTGCCGGCACGAGGTGCGGGTGCATTCTGACTACGACGAATCAGGTGGCGGTGGCCGTGGAAGGTTGCGGCGGTGTTTGAGGTGGAGTCAGTTGGCTTTACTTTGGCCTTTCCATGGAAGGTTCCGACGGGTTAACCCAGAAGGGTAG 960 0.5479 MSLSPPRARTTYQLYWCFRCNRLVALAPTSPSDIICPRCFQHFLCEFNLPRPTLLAGFTNPRPSPEARLLDALSLVLDQPVRRFGSRFFDPEYEHPHFARIPGRPHEYEGRTRENPRVEIPVRRIRHSRHLSFDAGAGGFDPEPETQPRPRSRVIVRPVDRSNSFERVPRRQDSIPRRVDPRDYFFGPGLNELIEQLTENDRQGPPPAPDRAIEAIPTVKIVETHLKENPHCPVCQEEFEVGGEAKELACKHIYHSDCIVPWLKLHNSCPVCRHEVRVHSDYDESGGGGRGRLRRCLRWSQLALLWPFHGRFRRVNPEG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0299 319 MobiDBLite consensus disorder prediction 131 150 - -
Lele26g0299 319 SUPERFAMILY RING/U-box 212 279 - -
Lele26g0299 319 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 162 276 - -
Lele26g0299 319 FunFam E3 ubiquitin-protein ligase RING1-like 196 279 - -
Lele26g0299 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 278 IPR013083 -
Lele26g0299 319 ProSiteProfiles Zinc finger RING-type profile. 232 273 IPR001841 -
Lele26g0299 319 CDD RING-H2_RNF126_like 232 273 - -
Lele26g0299 319 Pfam Ring finger domain 231 273 IPR001841 -
Lele26g0299 319 Pfam zinc-ribbon 13 46 IPR039525 GO:0061630
Lele26g0299 319 SMART ring_2 232 272 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0299 Lele-ChrLele26 1762634 1763593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0299 204 299 C3H Transcription Factor Family AT1G68180 49.057 4.06e-27 104