Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0297 ATGGTGAAGAGAGAACACGAGATCCAGGAGGCGGCGTCGAGGGGAAAACACTGCGTATCAGATGGGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTTTCAGAGATTAGAGCTCCTAACCAGAAGACAAGAATATGGCTGGGCTCTTATTCAACTCCTGAGGCTGCAGCCAGAGCCTATGATGCTGCACTTCTGTGCCTGAGAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTTCCACGCACTTCAATATTCCTCAAGACACTCTCCTATCACCTAAATCAATCCAAAGAGTAGCTGCAGCTGCTGCTAGTGCTTCTGTTGATAATGCCCCCATCCCACCTCCTCCTCCTATTGCTTCGGCTTCTTCCCCATCAGTCTCATCTTCATCAATGGTTTCCTCTCCCTCTGATCTAGTCGATGATGATGCTTCGTTAATCTCATCCTTTGAGGCCTTCTCTGGCTATGATCACCCCCATGAACCAATGGTTGTGATTGAACCTTGGTACGGCCTTGAAGGGCTACAATCCCCTAAATATGTTGATCAAATTCTCACTGGTTCTTCTTTTGATGACTTTTATTCACACCAGCTGCTCGATGATCTCTGCGAAGAAAGCAACATCAGTTTGTGGAGCTTCTGCTGA 663 0.4751 MVKREHEIQEAASRGKHCVSDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLRGSSANLNFPSSSSTHFNIPQDTLLSPKSIQRVAAAAASASVDNAPIPPPPPIASASSPSVSSSSMVSSPSDLVDDDASLISSFEAFSGYDHPHEPMVVIEPWYGLEGLQSPKYVDQILTGSSFDDFYSHQLLDDLCEESNISLWSFC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0297 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 147 - -
Lele26g0297 220 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Lele26g0297 220 MobiDBLite consensus disorder prediction 114 142 - -
Lele26g0297 220 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Lele26g0297 220 FunFam ethylene-responsive transcription factor ERF014-like 24 84 - -
Lele26g0297 220 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Lele26g0297 220 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Lele26g0297 220 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Lele26g0297 220 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Lele26g0297 220 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Lele26g0297 220 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0297 Lele-ChrLele26 1752566 1753228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0297 26 219 AP2-EREBP Transcription Factor Family AT1G21910 48.276 5.97e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g0297 AP2 9.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0297 26 1752566 1753228 Lele27g1802 27 23027484 23028044 hybridization