Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0274 ATGCTGACCCGGTTTGCGTCTTCACTTATCTGTGCTTGCGATGCCACGGTTCATGAACGACTGCTTAGAACATGTGATGACTTTGTCTGGCCCGTTGATACTACATTTGTTGGTCGTTTCATTATTGACGTTGAATTCCTTGACCTGAAGATCTGTCCTCTGAATGTAAGTTCCTCTGCTTATAAATTTATTAATATAAAGTTGATTGCCCTCCAATGCCTCTCTCGCATGCTTGATGAGGGAATACATGCTGATCTTACCATTAACACTGCAGATGGTACATTGAGAGCTCACAAGGCAGTTTTATCTGCAAGTTCTCCTGTGTTTCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAATCATCTACGATCCACATAGAAGACATGTCACTTGAATCTTGCATGGCTCTTCTAAGTTACTTATATGGCACAATAAAGCAAGAAGATTTGTGGAAGCACCGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATTACTGGTCTTGAAGATACTTGTGAGGAAAGCTTATTGGAAGATCTTAACTCAGGAAATGTCCTTGAGAGGCTACACGAAGCATGGCCTTATCAGTTGCACAAGTTGAAGAAAGGGTGCTTGACCTTCATCTTTGATTTTGGCAAGATATATGACGTACGAGAAGAAATAAATAACTTCTTCAGGCATACAGATGGGGAGCTGATGATTGAGATGTTTCAAGAGATGCTTACATTTTGGAAACCGGTATAG 750 0.4093 MLTRFASSLICACDATVHERLLRTCDDFVWPVDTTFVGRFIIDVEFLDLKICPLNVSSSAYKFINIKLIALQCLSRMLDEGIHADLTINTADGTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCMALLSYLYGTIKQEDLWKHRLALLGAANKYDITGLEDTCEESLLEDLNSGNVLERLHEAWPYQLHKLKKGCLTFIFDFGKIYDVREEINNFFRHTDGELMIEMFQEMLTFWKPV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0274 249 Pfam BTB/POZ domain 76 180 IPR000210 GO:0005515
Lele26g0274 249 SMART BTB_4 84 182 IPR000210 GO:0005515
Lele26g0274 249 CDD BTB_POZ_ZBTB_KLHL-like 83 165 - -
Lele26g0274 249 PANTHER OS08G0495500 PROTEIN-RELATED 14 248 IPR044714 -
Lele26g0274 249 ProSiteProfiles BTB domain profile. 84 143 IPR000210 GO:0005515
Lele26g0274 249 Gene3D Potassium Channel Kv1.1; Chain A 65 211 IPR011333 -
Lele26g0274 249 SUPERFAMILY POZ domain 70 180 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0274 Lele-ChrLele26 1625895 1626865 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele26g0274 BTB 2.3e-22 CL0033