Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0269 ATGGAGACGGAGAGAGTGGCGACTATGACGGATAAGTCATTAACGCTGACAATGAAGATGGAGGCGAAATCGGATGTTGAGGATAGTATTAAGCTGCAGAAGGAAGAAGATCTGCATAATTTCCATGTCTTAGCCGTCGACGATAGTCTTATCGATCGCAAACTTCTCGAGAAGCTCCTTCAGGTCTCTTCTTGTAAAGTGACGAGTGTGGACTCCGGGGATAAGGCTTTGAAATATCTTGGTCTTGTTGACGACCTTGATAATGCTTCTTCAACTTCTTCAGAATCATCATCATCTTCTCCCCAGTCACCGCATGTAGAGGGAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAACACGTACCGGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAGGAGTTTCTACTGAAGCCACTTAAGTTATCCGACGTGAAGAAGCTTGAGCCGTACCTTGGGAAATCCGTGGATAAGAATGAGAATAATTCATGGGGCCAACAAGAATCTGGTAACAGTGACGGAACAACCGACAGGGACTGCAATTCCAACAGTAATATCAACACTTGCATCGCCAAAAGGAAGGCCATGTCTCCTCAACCTTCTGACAGATCCAGACCCAAAATCAAAGGCTTGACGGTCGTCTAA 735 0.4544 METERVATMTDKSLTLTMKMEAKSDVEDSIKLQKEEDLHNFHVLAVDDSLIDRKLLEKLLQVSSCKVTSVDSGDKALKYLGLVDDLDNASSTSSESSSSSPQSPHVEGMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCLEGGAEEFLLKPLKLSDVKKLEPYLGKSVDKNENNSWGQQESGNSDGTTDRDCNSNSNINTCIAKRKAMSPQPSDRSRPKIKGLTVV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0269 244 Pfam Response regulator receiver domain 43 176 IPR001789 GO:0000160
Lele26g0269 244 Gene3D - 19 181 - -
Lele26g0269 244 SUPERFAMILY CheY-like 39 176 IPR011006 -
Lele26g0269 244 MobiDBLite consensus disorder prediction 186 224 - -
Lele26g0269 244 ProSiteProfiles Response regulatory domain profile. 42 183 IPR001789 GO:0000160
Lele26g0269 244 CDD REC_typeA_ARR 43 178 - -
Lele26g0269 244 PANTHER TWO-COMPONENT RESPONSE REGULATOR 41 199 IPR045279 GO:0009736
Lele26g0269 244 SMART REC_2 41 179 IPR001789 GO:0000160
Lele26g0269 244 MobiDBLite consensus disorder prediction 185 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0269 Lele-ChrLele26 1588862 1590848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0269 41 241 Response Regulator Gene Family AT3G57040 48.018 4.74e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele26g0269 Response_reg 2.4e-16 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0269 26 1588862 1590848 Lele27g1829 27 23185834 23190297 hybridization
Lele26g0269 26 1588862 1590848 Lele28g0278 28 1657030 1661049 hybridization