Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0262 ATGTCAAAGTCTACATCTCCGGAACCGCCACTGTCCATTTATTCTTCATCTTGGACTAGGTCAATATTTATGTTCATGGAAACTAAACCGGCGGAGGAAATGGATGATCCAGAATCTACAATGACTGCAGTTGCTAATTTTGTTGAGCAACTGCATGCCAACTTGTCATCACCACTTGAGAAGGAATTTATCACTGCACGTTTGCTAGGCATTGCCAGGGCAAGAAAGGATGCTAGAATACTTATTGGCTCTCATGCCCAAGCAATGCCATTGTTTATAAGCATTCTCAGAAATGGAACCCCTCTGGCAAAAGTTAATGTTGCTGCCACTTTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCTTTACTGTCACTTTTGAAGTCTGAAACCACAGAGGCAAGGAAGGCCGCAGCTGAATCAATATATGAAGTTTCCTCTGGCGGTCTTTCAGATGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAACTTTATGGGATCAACTAAATCCAAAAAACAAGCAAGACAAAGTTGTGGAGGGTTTCATTACTGGGGCATTGAGAAATCTGTGTGGTGACAGAGACAGATACTGGAAAGCGACACTGGAAGCAGGGAGTGTGGATATTATTGTGGGTCTCTTGTCTTCAAACAATGCTGTTGCTCAGTCAAATGCAGCTTCTCTGCTAGCACGACTGGTGCTGGCTTTCAGTGATAGCGTCCCCAAAGTAATAGAATCTGGTGCAGTCAATGCTTTACTTCGGCTTGTTGGTCGGGAAAATGATATTTCTGTCCGAGCAAGTGCTGCCGATGCTCTAGAGGCCCTTTCATCAAAGTCAACTAAAGCAAAGAAAGCCATTGTAAGTGCAGATGGTGTTCCAATTCTTATTGGGTCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGAAAACGGCCAGGATCTGCAGGAGCATGCAACTCACGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATACTATATCTTGGAGAACTCTCCCATTCTCCTCGCCTAGCTGCACCAGTTGGTGATATAATTGGAGCTCTTGCCTATACACTGATGGCGTTTGAGGACAAACACGATGTTGATGGGGAGCCTTTTGATGCAACTAAGATAGAGGATATTCTAGTGAAACTATTAAAGCCTCGGGATAACAAGCAGATTCAAGAGCGAGTACTAGAGGCCATGGCTAGTCTATATGGAAACATCTATCTCTCGAAATGGCTTGTGCATGCAGATTCAAAAAAGTTTCTTATTGGACTCATTACTATGGCTGCTGCTGATGTGCAGGATTATCTTATACTCTCCTTGACAAGCTTGTGCTGTGATAGGGTAGGAATATGGGAGGCCATAAACAGAAGAGAAGGCATCCAATTACTCATCTCAATGCTGGGACTCAGTGAGCAGCACCAAGAGTATGCAGTTCAGTTGCTATCAATTTTAATTGACCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAAAGACAGGATCGCAGAACGCTAGAGAGGAAGCTGCTCATACTCTGTGGAACCTCTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGCGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGGTTGGTGGACCAAGAGGACAAGAAGTTTCTGCCATGGTACTCATTAAGCTTGTGCGAATAGCAGATTCTGCTACCATTGATCAATTGTTGGCATTGCTTCTCGGGGAAACTCCAGGCTCAAAGGTCCATGTAATTCGAGTCTTAGGTCATGTACTTACTATAGTTTCACAGATGGACCTCCTGCAGAAGGGTTCTGCAGCTAATAAGGGGTTGAGATCTCTAGTTCAGGTTCTCAACTTATCAGATGAAGAAACCCAGGAACATGCGGCTTCTGTCCTAGCTGATTTGTTCAGTGCCAGACAAGACATCTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCATTGCATGAAGCTTTTGACCAGCAAAAATCAAGTTGTTGCAACTCAGTCAGCTCGAGCAATGGGTGCTCTGTCTCGTCCAACACACAGCAGATCTGCCAATAAGATGCCTTATATTGGAGAGGAGGATGTCAAGCCACTAATTAAATTGGCTAAAACTTCCTCCATTGATGCCGCTGAAACTGCAGTTGCTGTGCTGGCCAATCTTCTCTTTGATACCTCTATTGCTGCTGAAGCTTTGGCAGGAGATCTTGTTTCATCTTTAACAAGAGTTCTGGTAGAAGGAACTCTGGAAGGTAAACAAAATGCATCATGTGCACTTCATCAGCTACTGACGCATTTTCCTGTTGGTGATGTTCTCAAGGGAGATGCTCAGTACCGTTTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAATATGGATGGAACTGATGCTGCTGATGCTTTAGAAGCAGTTGCACTGCTTGCCCGGACAAAACAGGGCGACAATTTCACTTACACTCCATGGTCTGCATTTGCAGAAACACCATCCAATATAGAACCTCTTGTACGCTGCCTGGCTGAGGGGCCTCCCCAAGTGCAGGATAAGGCAATTGAAATTTTGTCTAGACTTTGTGGTGATCAATTAGTTGTTCTTGGGGATTTGCTGGCTGCTATGTCTAGATCCATTAGTTCATTAGCTGATAGAATGATGAACTCCTCCAGTTTAGAAGTCAAAGTTGGAGGGGCTTCCTTACTTATTTGTGCTGCAAAGGAGCATAAAGAGCTGTCAATGGATGTACTTGTCACTTCTGGGGATCTAAAACCATTAATATATGCTTTAGTAGATATGCTGAAGCAGAACTCTGGCTGTTCATTAGAGGTTGAAGGACAAACTCCTAGAAATTTTATGGTGAAGAGTGCATTTCAGGAAGTTGATCTTGATATTCTTGATCTGGCCAAAGTCTCGGGTGTTACTGTTGCCTTGTGGCTACTCTCGATTATTGCTTCTTCCAATATAAAGAACAAACTCACAATTATGGAAGCTGGTGGACTTGAGTCTCTCTCTGAAAAGCTTGCAAACCATACTTCCAATCCACAGGCAGACTTTGAGGATACAGAAGGAATATGGATAAGTGCCTTGCTCATGGCCATTTTGTTTCAAGATGGAATTGTTGTTCTATCTCCAGTAACAATGCACATTTTACCTTCTCTCACTCGTTTACTACGGTCCGAAGAAGTGGCATATAAATATTTTTCTGCACAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAAGGGAATAGCTCTTGCTATCGCAAACTCTGGTGCCATTGCTGGATTGATTTCTATGGTCGGCTATATAGAGTCGGACATGCCAAACATTGTTGCTTTATCAGATGAATTTTCACTGGTGCGAAATCCTGATCAAGTAGTTTTGAATCACCTTTTTGAAATTGAAGATATAAGATTGGGATCTAGTGCACGGAAATCTATTCCTCTCTTGGTGGATCTATTGAGACCAATTCCAGAAAGGCCTAGTACTCCACCCGTTGCTGTTAAACTGTTGACATGCATTGCAGATGGAAGTGATACAAACAAAATAATCATGGCTGAAGCAGGGGCTTTGGAAGCTTTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACTGAGGCCAGTATTTCTGAGTTATTAAGAATACTATTTTGCAATTCTGACCTTATTAAACATGAAGCATCAGCAAGTTCTCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATATAGTGCAGCAGGAGCACTTTGTGAACTTTTCGATTCCGAGAGTATTAGAAACTCAGAAATAGCTAAACAGGCCATTCAGCCTTTGATTGACATGCTCAATACAACATCAGGTAGTGAGCAGGAGGCTACTCTAATTTCATTAATCAGATTAACGTCTGGAAATTCTTCAAAATCATCTTTTTTTGCTGATGTAGAAGGGAACCCACTTCAGAGTTTATACCAGATATTGTCTTCTGCTTCATCCTTGGAACTGAAGAGAAATGCTGCGCAACTTTGCTTTGTCCTTTTTGCTAGCAGGACGATTAGAGCTGATCCACTTGCCTCAGAATTCATAGAACCCCTTGTTTCACTGATGCAGTCTGATTCTAGCCCGGCAATAGAAGCTGGGATTTTTGCTTTTGAGAGATTATTGGAAGATGAACAACATGCGGAGCTTGCAGTAGCCTTCAATGTTGTGAATCTCCTTGTTAGTTTGGTTGTGGGTTCCAACCATCAGCTGATTGAGGCTACCATATCTGCTCTCATCAAATTGGGCAAAGATAGGACGCCATGCAAACTAGGCATGGTTAAAGCTGGCATTATTGATAATTGTCTGAAGTTACTTGAATTTGCACCTAGCTCACTGTGCTCCACAATTGCTGAACTATTCCGCATTTTAACAAATAGTAGTGCAATTGCTAGAAGTTCAGCAGCTGCAGAAATTGTAGAACCCCTTTTTCAAGTTTTGCTCCGTCTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATACTGGAGAAGCCACAAAGTCTTGCAACCTTAAAACTAACTCCTAGCCAAGTTATTGAGCCCTTGATCTCATTCCTAGAATCCCCATCCCAAGCCATTCAGCAGCTTGGCACTGAACTGTTGTCTCATCTTCTTTCACAGGAACATTTTCAGCAAGATATTAAAACAAAGAATGGTGTTGTTCCTCTTGTTCAACTTGCAGGAATTGGAATACTGAACTTACAGCAAACAGCAATAAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGCATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTTTCTAATGTACTATGTTCCAATGCTGATTATTATTTTAAAGTTCCTGTGATAGTTCTTGTAAAACTGTTGCACTCAACGGTTGAGAGTACCATTAGTGTAGCTCTTAATGGCCTAATTATTCATGAAAGAAGTGATGCTTCAAGTGCTGAACAGATGACGGAGTCTGAAGCTATAGATGTTCTGTTAGACCTTTTAAGATCTCATCAATGTGAAGAAGCATCCGGCAGATTACTTGAAGCCCTATTCAACAATGTGAAAATAAGAGAGATGAAGGCATCTAAGTATGCAATAGCACCGTTATCTCAGTATCTGTTAGATCCACGGACCAGATCACCATCTAGCAAGCTTCTTGCTGCTTTAGCTTTGGGAAATATTTCCCAGCATGAAGGACATGCTAGAGCTGGTGGTTCTGTTCTGCTTGTCGTGCATTAG 5430 0.4234 MSKSTSPEPPLSIYSSSWTRSIFMFMETKPAEEMDDPESTMTAVANFVEQLHANLSSPLEKEFITARLLGIARARKDARILIGSHAQAMPLFISILRNGTPLAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSETTEARKAAAESIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPKNKQDKVVEGFITGALRNLCGDRDRYWKATLEAGSVDIIVGLLSSNNAVAQSNAASLLARLVLAFSDSVPKVIESGAVNALLRLVGRENDISVRASAADALEALSSKSTKAKKAIVSADGVPILIGSIVAPSKECMQENGQDLQEHATHALANICGGMSSLILYLGELSHSPRLAAPVGDIIGALAYTLMAFEDKHDVDGEPFDATKIEDILVKLLKPRDNKQIQERVLEAMASLYGNIYLSKWLVHADSKKFLIGLITMAAADVQDYLILSLTSLCCDRVGIWEAINRREGIQLLISMLGLSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLKTGSQNAREEAAHTLWNLCCHSEDIRACVESAGAIPAFLWLLKVGGPRGQEVSAMVLIKLVRIADSATIDQLLALLLGETPGSKVHVIRVLGHVLTIVSQMDLLQKGSAANKGLRSLVQVLNLSDEETQEHAASVLADLFSARQDICDSLLATDEIVLHCMKLLTSKNQVVATQSARAMGALSRPTHSRSANKMPYIGEEDVKPLIKLAKTSSIDAAETAVAVLANLLFDTSIAAEALAGDLVSSLTRVLVEGTLEGKQNASCALHQLLTHFPVGDVLKGDAQYRFTVLALVGSLSAMNMDGTDAADALEAVALLARTKQGDNFTYTPWSAFAETPSNIEPLVRCLAEGPPQVQDKAIEILSRLCGDQLVVLGDLLAAMSRSISSLADRMMNSSSLEVKVGGASLLICAAKEHKELSMDVLVTSGDLKPLIYALVDMLKQNSGCSLEVEGQTPRNFMVKSAFQEVDLDILDLAKVSGVTVALWLLSIIASSNIKNKLTIMEAGGLESLSEKLANHTSNPQADFEDTEGIWISALLMAILFQDGIVVLSPVTMHILPSLTRLLRSEEVAYKYFSAQAMASLVCNGDKGIALAIANSGAIAGLISMVGYIESDMPNIVALSDEFSLVRNPDQVVLNHLFEIEDIRLGSSARKSIPLLVDLLRPIPERPSTPPVAVKLLTCIADGSDTNKIIMAEAGALEALTKYLSLSPQDSTEASISELLRILFCNSDLIKHEASASSLNQLIAVLRLGSRNARYSAAGALCELFDSESIRNSEIAKQAIQPLIDMLNTTSGSEQEATLISLIRLTSGNSSKSSFFADVEGNPLQSLYQILSSASSLELKRNAAQLCFVLFASRTIRADPLASEFIEPLVSLMQSDSSPAIEAGIFAFERLLEDEQHAELAVAFNVVNLLVSLVVGSNHQLIEATISALIKLGKDRTPCKLGMVKAGIIDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSAAAEIVEPLFQVLLRLDFDLWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLSQEHFQQDIKTKNGVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLCSNADYYFKVPVIVLVKLLHSTVESTISVALNGLIIHERSDASSAEQMTESEAIDVLLDLLRSHQCEEASGRLLEALFNNVKIREMKASKYAIAPLSQYLLDPRTRSPSSKLLAALALGNISQHEGHARAGGSVLLVVH 1809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0262 1809 SUPERFAMILY ARM repeat 489 800 IPR016024 -
Lele26g0262 1809 Gene3D - 1354 1608 IPR011989 -
Lele26g0262 1809 SUPERFAMILY ARM repeat 319 487 IPR016024 -
Lele26g0262 1809 Gene3D - 1612 1806 IPR011989 -
Lele26g0262 1809 Gene3D - 364 627 IPR011989 -
Lele26g0262 1809 SUPERFAMILY ARM repeat 1178 1547 IPR016024 -
Lele26g0262 1809 SMART arm_5 293 341 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1209 1249 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 207 248 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1419 1459 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 162 206 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 756 796 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1749 1793 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 628 667 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 506 546 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1461 1501 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 715 755 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 548 588 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 117 157 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 250 291 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 463 504 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1546 1587 IPR000225 GO:0005515
Lele26g0262 1809 SMART arm_5 1588 1628 IPR000225 GO:0005515
Lele26g0262 1809 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Lele26g0262 1809 Gene3D - 190 358 IPR011989 -
Lele26g0262 1809 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 25 1804 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lele26g0262 1809 SUPERFAMILY ARM repeat 864 1136 IPR016024 -
Lele26g0262 1809 SUPERFAMILY ARM repeat 1560 1794 IPR016024 -
Lele26g0262 1809 Gene3D - 1162 1353 IPR011989 -
Lele26g0262 1809 Gene3D - 807 1146 IPR011989 -
Lele26g0262 1809 Pfam Armadillo/beta-catenin-like repeat 510 545 IPR000225 GO:0005515
Lele26g0262 1809 Gene3D - 628 802 IPR011989 -
Lele26g0262 1809 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 261 305 IPR000225 GO:0005515
Lele26g0262 1809 Gene3D - 20 189 IPR011989 -
Lele26g0262 1809 SUPERFAMILY ARM repeat 77 312 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0262 Lele-ChrLele26 1539746 1545771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0262 464 668 U-box Gene Family AT3G46510 33.333 4.20e-12 69.3