Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0254 ATGGAAGATGTAAGCAATCGTATAGCACCGGCACCTAATGTTGATGATGGCTTCTCCAGTCCCAAGAAACCCAGGTGGAGGGACTTTCTATCTTACGTAGGTCCTGGTTTTCTTGTGTCCATGGCTTACCTTGATCCTGGAAACTTGGAAACTGATATGCAAGCTGGAGCAAACCACAGATATGAGCTGCTATGGGTGATACTTATTGGGCTATTTTTTGCTCTCATTATTCAGTCCTTGGCAGCAAACCTTGGCGTAACCACCGGGAAGCACCTTTCAGAATTATGTAGGGTGGAGTACCCATCGCTAGTGAAGTACTGCTTATGGTTTCTGGCTGAGATTTCCGTCATAGCTGCAGATATAGCCGAAGTTGTTGGCACAGCCTTTGCGCTCAACATACTGTTCCACATCCCACTATGGGCAGGAGTTCTCTTGACTGGCTTCTCCACTCTTTTGCTTCTTGGCCTCCAGAGATTTGGAGTATTCCATTTACCTTTCTTCTTTGAATCAAGAATTTCATTGGACATTGGGAAGCTGGAAGTGCTGATATCAGCTCTAGTATTTATAATGGCGGGATGCTTCTTTGTGGAGATGAGCTATGTAAAACCACCAGCTTCTGATGTATTGAAGGGAATGTTTGTCCCTAGACTTGATGGTCATGGAGCCACTGCTGACGCCATTGCCCTTTTCGGAGCACTCATCATGCCGCACAACCTCTTTCTCCATTCTGCTCTTGTTCTCTCTAGAAAAGTACCCACCTCTGTCCGTGGCATCAATGATGCATGCAGATACTTCCTAATAGAAAGTGGGTTTGCTCTGTTTGTAGCATTTCTAATAAACGTAGCAGTAGTTTCAGTATCAGGCACAGTATGCTCAGAAAATAATCTTTCAGCTCAAGATACCGAAAGATGCGACGATCTCTCCCTCGATTCTGCCTCTTTTCTTCTCAAGAATGTGTTGGGAAGGTCAAGTTCAACAGTTTATGCCATAGCACTTCTGGCCTCTGGACAAAGCTCTACGATCACTGGCACATATGCTGGGCAGTACATCATGCAGGGATTCTTGGATTTGAGGATGAAAAAATGGATGCGGAATTTGATGACTAGGTGTGTTGCCATAGTACCTAGTCTTGCTGTTGCAATTATTAGCGGATCTTCGGGTGCAAGCCGCCTTATTATCATTGCCTCGATGATACTTTCGTTTGAGCTTCCATTTGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCCCCAAAATGGGACCTCACAAGAATTCTACAATTATCATTGTGATTTCATGGATCCTAGGCTTGGGAATCATCGGCATCAACGTGTACTACCTAAGCACAGGTTTTGTGGGCTGGTTAATTCACAGCAGTCTCCCAAAAGTGGCAAACATATTCATTGGGATCATAGTATTCCCTCTCATGGCCATTTATGTTGTTTCTGTTATCTACCTCACCTTCAGAAAAGACACTGTCAATACATTCATAGAGACTCAGAACGACTCTCTAGTGCCAACCCACATGGAAAAGGGCCTCGTTAATGCTAACGAGCAATTGGAATTGAGTCCAATTCCTTTTAGACAAGATTTAAGGGATATCCAACTTCCAGATTGA 1620 0.4426 MEDVSNRIAPAPNVDDGFSSPKKPRWRDFLSYVGPGFLVSMAYLDPGNLETDMQAGANHRYELLWVILIGLFFALIIQSLAANLGVTTGKHLSELCRVEYPSLVKYCLWFLAEISVIAADIAEVVGTAFALNILFHIPLWAGVLLTGFSTLLLLGLQRFGVFHLPFFFESRISLDIGKLEVLISALVFIMAGCFFVEMSYVKPPASDVLKGMFVPRLDGHGATADAIALFGALIMPHNLFLHSALVLSRKVPTSVRGINDACRYFLIESGFALFVAFLINVAVVSVSGTVCSENNLSAQDTERCDDLSLDSASFLLKNVLGRSSSTVYAIALLASGQSSTITGTYAGQYIMQGFLDLRMKKWMRNLMTRCVAIVPSLAVAIISGSSGASRLIIIASMILSFELPFALIPLLKFSSSSPKMGPHKNSTIIIVISWILGLGIIGINVYYLSTGFVGWLIHSSLPKVANIFIGIIVFPLMAIYVVSVIYLTFRKDTVNTFIETQNDSLVPTHMEKGLVNANEQLELSPIPFRQDLRDIQLPD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0254 539 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 Hamap Divalent metal cation transporter MntH [mntH]. 13 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 Pfam Natural resistance-associated macrophage protein 50 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g0254 539 PRINTS Natural resistance-associated macrophage protein signature 396 415 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 PRINTS Natural resistance-associated macrophage protein signature 364 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 PRINTS Natural resistance-associated macrophage protein signature 108 134 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 PRINTS Natural resistance-associated macrophage protein signature 336 355 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 PRINTS Natural resistance-associated macrophage protein signature 226 249 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele26g0254 539 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 27 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0254 Lele-ChrLele26 1509636 1512413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0254 5 539 Inorganic Solute Cotransporters AT1G15960 57.222 0.0 609