Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0241 ATGTTTGGGAGCTCTCTTACGTTGAAGATAAATGAAAACCACAAACATGGAGAGTTATTGCGTCATTTAAAGATCATATTGAGTGAGAATAAATTTGAAGATGGTCAAAAGACTAATCAGGATCAGGCGTCTGGCAACATGGCAATAAAAAAGCCGAGATCGTTGCACTCCGACCAATCCAAAGTCCAACATAGTCCCCATCACTCCGACTTATCGGAAGCAAGACGTCTGGCCAAGGAATTTCAAGCTCAGGGAGACCAGCTCGCCGAGGTACTACAACCATCGTCCACATCTCTCCGTTCATTTTCTTTTTGGAGGGCGAGGGATAGAATTGTTTTAGAAGCCTTGATAGTTCTCTACGGTCTGAGATATCATTTTAATGACTTTAGCGGGGGCAAGCAATTGTTACCTGGAGTGAAAATTATGTCCTTTTTATTTATACCATACCCTTCCAAGCAGGATGGGAAGTACGGGGAAGCATTAGGTAAATGGGAGTCTGCTCTGTCATTGACACCTGAAGTTGCGGTTTTACATGAACAAAAGGCCCAAGTTCTACTGGAAATTGGTGTTGCTTGGAATGCTTTGAAGGCTGCAATGCGTGTGTCCCTGATCTTTATTCTTAATCTTGCACGGGTCACAGTTGGCAGGGCACAGCTAAATTTTGGGGAGCCTGATTGTGCTATTGAGAGCTTTGACAGAGCCCTATCTATCAAGCCTGATTGCGCGGATGCTCAAGAAGACAGAAAAACTGCATTACGTCTTGTAAAGAAGAGAAAACAACTCCACTCAGCAGTCTTGAGTAATACTGAAAACGTTAATACCGGCGCACGGCTAATGTCCCACTTTGAGGAAATGCAGGAAACCGATGACGTAAACTCAATGCGATGCCTTTCATGCCAGGATTATTACGTCCCAGGTGACGGCGGCACCTGCAAGGAGTGCTATGAAGAAGCCAACGAGACCGAGGAGGAGCTCAAGAATGAGATCGACGACTTGAAGGCCAAAGTTGCCTTCCTTAGCCTCTTGTCTCCTGTTGATCACCATAATCGCTCCGATACTGAAGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTACCCTCTCTGACTGTTCCGGCTCACAAGGTTGTTCTGGCGAGTCGCTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGCGGAAAGACGAAGTGGGACCATAAAGATTAGTGATGTTTCATACAATGCTCTTCGGGCCTTTGTGGATTATTTATACACTGCAGAAGCATGCCTTGATGACCAAATGGCCTGTGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCGTATTGTGAGAAGTATTTGATGGCGAGATTGAACTGGGAAAAAGCAGTCGCGAATTATGCCTTCGCTCACCAACACAATGCTACACAATTGCAAGATGCAGCCTTGGCATTAATCACAGACAACATGGACAAACTTTCTAAGCACGAGGAGTATGAGGATCTGGCGGAGAGTAACCCTCGTATTGTGGTTGAGATCTATGAAGCTTATCTCTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTTCAAAAAGAAATAG 1602 0.4469 MFGSSLTLKINENHKHGELLRHLKIILSENKFEDGQKTNQDQASGNMAIKKPRSLHSDQSKVQHSPHHSDLSEARRLAKEFQAQGDQLAEVLQPSSTSLRSFSFWRARDRIVLEALIVLYGLRYHFNDFSGGKQLLPGVKIMSFLFIPYPSKQDGKYGEALGKWESALSLTPEVAVLHEQKAQVLLEIGVAWNALKAAMRVSLIFILNLARVTVGRAQLNFGEPDCAIESFDRALSIKPDCADAQEDRKTALRLVKKRKQLHSAVLSNTENVNTGARLMSHFEEMQETDDVNSMRCLSCQDYYVPGDGGTCKECYEEANETEEELKNEIDDLKAKVAFLSLLSPVDHHNRSDTEVILVPSDESSDLPSLTVPAHKVVLASRSPVFRAMLENDMAERRSGTIKISDVSYNALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKAYCEKYLMARLNWEKAVANYAFAHQHNATQLQDAALALITDNMDKLSKHEEYEDLAESNPRIVVEIYEAYLSKQVNTAASKKSFKKK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0241 533 Pfam BTB/POZ domain 369 454 IPR000210 GO:0005515
Lele26g0241 533 FunFam BTB/POZ domain-containing protein 459 532 - -
Lele26g0241 533 ProSiteProfiles TPR repeat profile. 208 241 IPR019734 GO:0005515
Lele26g0241 533 MobiDBLite consensus disorder prediction 52 71 - -
Lele26g0241 533 SMART BTB_4 353 457 IPR000210 GO:0005515
Lele26g0241 533 Gene3D Potassium Channel Kv1.1; Chain A 335 458 IPR011333 -
Lele26g0241 533 Coils Coil 311 342 - -
Lele26g0241 533 MobiDBLite consensus disorder prediction 54 71 - -
Lele26g0241 533 SUPERFAMILY TPR-like 153 273 IPR011990 GO:0005515
Lele26g0241 533 CDD BTB_POZ_ZBTB_KLHL-like 370 440 - -
Lele26g0241 533 PANTHER SPECKLE-TYPE POZ PROTEIN 83 524 - -
Lele26g0241 533 SUPERFAMILY POZ domain 370 454 IPR011333 -
Lele26g0241 533 CDD BACK 466 501 - -
Lele26g0241 533 ProSiteProfiles BTB domain profile. 353 427 IPR000210 GO:0005515
Lele26g0241 533 Gene3D - 459 533 - -
Lele26g0241 533 Gene3D Tetratricopeptide repeat domain 151 276 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0241 Lele-ChrLele26 1396516 1406656 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele26g0241 BTB 6.3e-22 CL0033