Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0239 ATGATCATCGGTTGGGCTATTTGGGATGACAATTGCTCCGAAGCAATCAAGAACAGAAGCAGCTATGCTTGCATGGATAATAGCTTCTGCGTGGATGCAATGAAGGGTTTCGAGGGAATCCTTACCTGTCTGGTTCTGATGGTTGCCGAGGTTGATTTTTCCTCCATGTTATCAGAGACTAGAGTTTGGATGTTCCTAGTTCATTTCCTTAATCCCCAGTGTGTTACGCCTACAAACTTGCCGACATCGATGAGTGCGGCAACAGCACATCAAATCCCTTCAGTCAAACGTGCCACAATTTGTACCGCACCTACAATTGTTCTTGCCTACCGGGATACGAAGGCAACGGCATCACTCATCAGCGTGTCCCTCTTGGTTCTTGGAATTGTCATATCCTCCTTATGTTGGGTGGGAAAGAAAAGAAAGCTCGTAAACATCAGAAATAAGTTCTTCGAGAAAAACGAGGGTCTCATGCTTCAGGAACAACTTTCCGAGCGACATGGTTACAATGAAATGGCAAAGCTATTTACTGAAGATGGGCACAAGGAAGCCACAGATAACTTCCATGAAAGAAAAATTCTTGAGCGTGGAGGCCAAGGAACAGTTTACAAAGGAATATTACCAGATAACAGAGTGGTTGCCATTAAGAAGTCCAGAATATCAGAGCAAAGCCAAGTCAAAGATTTCATCAACGAAGTGCTTGTACTCTCACAAATTAACCACAGGAATGTGGTCAAACTTCTGGGTTGCTGTTTGGAAACTGAAGTTCCTCTGCTACTTTATGAGTATGTCCTTAATAATACTCTGCTCCTCCTTATAGACCCATCAATGAAAACATCATGAAAGAAGGTGGTTGCAGTGAACAGACCAGAAGAAGACAGAAATTTAGCTATATACTTTGTTTCTTCAATGAAGAAAGATCGTTTGCTTGAGATTCTAGATAGTAGAGTGTTGGACCCAAAAAATGTAGGGCAACTTGCTGTATTGGCGAGTGGATCTATAAGTGTAAAGGGGGAAGACAGTCCAACCATGAAGGAAGTATCAATTGAGCTAGAAGATCTGATACATCCGTGGAATGGAAAATATTTAAATTCCGAGGGAACTGAATACTTGCTTGCTCCAATATATGGAACTGAAAGTAGTATTAGCAACTCCGTGGGGTTTGAAAGCATAGGGAACCAACTTGCACTTGAGATGAGAAGTGGATGCTGA 1212 0.4224 MIIGWAIWDDNCSEAIKNRSSYACMDNSFCVDAMKGFEGILTCLVLMVAEVDFSSMLSETRVWMFLVHFLNPQCVTPTNLPTSMSAATAHQIPSVKRATICTAPTIVLAYRDTKATASLISVSLLVLGIVISSLCWVGKKRKLVNIRNKFFEKNEGLMLQEQLSERHGYNEMAKLFTEDGHKEATDNFHERKILERGGQGTVYKGILPDNRVVAIKKSRISEQSQVKDFINEVLVLSQINHRNVVKLLGCCLETEVPLLLYEYVLNNTLLLLIDPSMKTSXKKVVAVNRPEEDRNLAIYFVSSMKKDRLLEILDSRVLDPKNVGQLAVLASGSISVKGEDSPTMKEVSIELEDLIHPWNGKYLNSEGTEYLLAPIYGTESSISNSVGFESIGNQLALEMRSGC 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0239 403 FunFam Wall-associated receptor kinase 2 158 263 - -
Lele26g0239 403 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 281 354 IPR045274 GO:0007166
Lele26g0239 403 Pfam Protein tyrosine and serine/threonine kinase 191 276 IPR001245 GO:0004672|GO:0006468
Lele26g0239 403 SUPERFAMILY Protein kinase-like (PK-like) 169 277 IPR011009 -
Lele26g0239 403 ProSiteProfiles Protein kinase domain profile. 188 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0239 403 Gene3D Phosphorylase Kinase; domain 1 152 263 - -
Lele26g0239 403 SMART tyrkin_6 188 351 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0239 Lele-ChrLele26 1387990 1389788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0239 280 402 Receptor kinase-like Gene Family AT1G21230 33.588 2.21e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele26g0239 PK_Tyr_Ser-Thr 1.4e-11 CL0016