Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0235 ATGAACTCTCTGATGCCACGTCTTTGTTGGAAAGATCAGCGACGAGCTTATGCGGGGAACGAGAGATCAAAGAGTTTCATACTGAGAAGTGAAAAACAGGGAATCTTGGGTATAAGCCCCAAAGGTGAATACAGAGATCCCATTACTTTACAGATAGCCCAGAAGCAAAACAAGTATGGCATTCTTCCAAAATCTTCAGATGCACCAATCCTTTGTGCTGGTTGTGGGACAAGGACGGCATTGTGCACGAAGAAATCAATGAGGTTCAGCTATTCTGACATACAGCAGGCGACAAACAATTTTTCAAATGATAACTTGTTAGGTGAAGGTGGATACGGTCACGTATACAAGGGTGTGCTTAGAGACGGACAGCAAATTGCCGCCAAGGTGAGAAAAGAAGAAAGCAGACAAGGGTTTTCTGAGTTCAACTCTGAGATTTATGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCCGTTAGGTTACTGTTGCAAGGGAAGCCAAAATATTCTGGTGTACGAATATATTTGCAATAAATCTCTTCACTGGCATCTGTATGGTAAGCAATACATGCAACTAGGTGATTTTGGTCTAGCCAAATGGGAGATGGATGATGAGACTCTGCGAACAAGGATAATGGATACCTTGCTCCAGAGTATGCTGATATCAGGACGTAAGGTGGTCAACGACAATCATCTTCAACAACTCTCTCTCAAACAGTGGGCGGAGCCATTGATTGAGAAGTTGGCTTTAAGTGAACTGGTTGACGCTCGCCTTAGGGAATCATACGACACAAACGAATTATACCTCATGGCCAAAGCAGCATACTTTTGTGTCCAAAGGGACCCCGGGATGAGACCATCCATGGGAGAGATGCAATTTATGGTAGAGATGGATGTGGGATTCCGACGTCGAAAGCCTCCTCTGTTGACACAGGTTCTATTTCTCTCCCACTCTCTCTCCCTCTCTGTGTGGCTCTTATCTTCTTCATCATCGTATCCTAAGGGAGAGTGA 1017 0.4415 MNSLMPRLCWKDQRRAYAGNERSKSFILRSEKQGILGISPKGEYRDPITLQIAQKQNKYGILPKSSDAPILCAGCGTRTALCTKKSMRFSYSDIQQATNNFSNDNLLGEGGYGHVYKGVLRDGQQIAAKVRKEESRQGFSEFNSEIYVLSFARHKNIVMPLGYCCKGSQNILVYEYICNKSLHWHLYGKQYMQLGDFGLAKWEMDDETLRTRIMDTLLQSMLISGRKVVNDNHLQQLSLKQWAEPLIEKLALSELVDARLRESYDTNELYLMAKAAYFCVQRDPGMRPSMGEMQFMVEMDVGFRRRKPPLLTQVLFLSHSLSLSVWLLSSSSSYPKGE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0235 338 ProSiteProfiles Protein kinase domain profile. 101 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0235 338 Gene3D Transferase(Phosphotransferase) domain 1 216 301 - -
Lele26g0235 338 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 222 297 - -
Lele26g0235 338 SUPERFAMILY Protein kinase-like (PK-like) 86 316 IPR011009 -
Lele26g0235 338 Pfam Protein tyrosine and serine/threonine kinase 104 188 IPR001245 GO:0004672|GO:0006468
Lele26g0235 338 ProSitePatterns Protein kinases ATP-binding region signature. 107 129 IPR017441 GO:0005524
Lele26g0235 338 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 73 176 - -
Lele26g0235 338 Gene3D Phosphorylase Kinase; domain 1 73 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0235 Lele-ChrLele26 1359334 1367386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0235 89 293 Trihelix Transcription Factor Family AT5G38560 32.042 7.38e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele26g0235 PK_Tyr_Ser-Thr 2.4e-11 CL0016