Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0223 ATGTTTGGTAAGTCAAACCGCTGTCAACATATGGGTAAATTTGCCCAGAATGAGGAGCACCTTTTCCCAGCCTTTCTCTTCCCCAACCCATTCTTTCTCGCTCTTTGTCGATCCTTTCATCACTCGTCGTCCTCTGTAGCCATGTCGAGCGCTGTTGGTCAGGTTATCAAGTGCAAAGCTGCGGTGGCATGGGAGGCTGGCAAGCCGCTTTCCATGGAAGAAGTAGAGGTGGCACCGCCACAGGCTGGCGAAGTGCGTTTGAAGATCCTTTTTACCTCTCTTTGCCACACTGATGTTTACTTCTGGGAGGCCAAGGGCCAGACTCCATTGTTTCCCCGTATATTTGGTCATGAAGCTGGAGGAGTTGTGGAGAGCGTTGGCGAGGGCGTGACTCATGTGAAACCAGGAGACCATGCCCTGCCCGTATTCACAGGAGAATGTGGGGAATGTCCACATTGCAAATCAGAGGAGAGCAACATGTGTGACCTTCTTAGGATCAACACCGACAGGGGTGTTATGATCAGCGACGGCAAGACCAGGTTCTCCAAAAATGGACAGCCCATATACCACTTTGTCGGAACCTCCACATTTAGTGAGTACACCGTTGTTCACGCCGGATGTGTTGCAAAGGTCAACCCTGCCGCTCCACTTGACAAAGTCTGTGTGCTCAGTTGCGGAATATGCACAGGTCTCGGCGCTGCCATTAACGTTGCAAAACCAAAGCCTGGCTCTACTGTTGCAGTCTTCGGACTGGGAGCTGTTGGCCTTGCTGCATGTGAAGGAGCAAGGATTTCTGGTGCATCAAAAATTATTGGGGTGGATTTAGTGAACAGCCGATTTGAAGAAGCAAAAAAATTTGGGGTCACTGACTTCGTGAACCCAAAAGAACACGACAAACCTGTTCAGGAGGTGATAGCTGGAATGACCAATGGAGGAGTAGACCGTGCAATTGAATGTACCGGGAGCATACAAGCCATGATTTCAGCATTCGAATGTGTTCACGATGGCTGGGGTGTGGCTGTACTTGTGGGTGTTCCAAACAAAGATGACGCATTCAAAACTCATCCCATGAATCTTTTGAACGAGAGGACTCTGAAGGGCACTTTCTATGGGAACTACAAGCCCCGCACTGATCTTCCTAATGTTGTGGAGAAGTACATGAAAGGGGAGCTGGAACTGGAGAAGTTCATAACGCACACGGTGACATTCTCGGAGATTAACAAGGCATTTGATTTGATGCTGAAGGGGCAGTCAATCAGGTGCATCATCCGTATGCAAGAGTGA 1284 0.4938 MFGKSNRCQHMGKFAQNEEHLFPAFLFPNPFFLALCRSFHHSSSSVAMSSAVGQVIKCKAAVAWEAGKPLSMEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGVVESVGEGVTHVKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMISDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKVNPAAPLDKVCVLSCGICTGLGAAINVAKPKPGSTVAVFGLGAVGLAACEGARISGASKIIGVDLVNSRFEEAKKFGVTDFVNPKEHDKPVQEVIAGMTNGGVDRAIECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVTFSEINKAFDLMLKGQSIRCIIRMQE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0223 427 Gene3D - 66 417 - -
Lele26g0223 427 PANTHER ALCOHOL DEHYDROGENASE 53 423 - -
Lele26g0223 427 CDD alcohol_DH_plants 56 424 - -
Lele26g0223 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 216 390 IPR036291 -
Lele26g0223 427 SUPERFAMILY GroES-like 375 424 IPR011032 -
Lele26g0223 427 FunFam alcohol dehydrogenase 1-like isoform X1 66 229 - -
Lele26g0223 427 Pfam Zinc-binding dehydrogenase 253 383 IPR013149 -
Lele26g0223 427 Pfam Alcohol dehydrogenase GroES-like domain 83 210 IPR013154 -
Lele26g0223 427 SUPERFAMILY GroES-like 52 233 IPR011032 -
Lele26g0223 427 Gene3D - 230 368 - -
Lele26g0223 427 FunFam Alcohol dehydrogenase class-P 230 368 - -
Lele26g0223 427 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 116 130 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0223 Lele-ChrLele26 1285464 1289413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0223 64 374 Monolignol Biosynthesis Gene Families AT1G72680 25.633 4.55e-12 65.1