Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0219 ATGTTTTTTTGTAGTGACTCGCAACCTTGCTGCTCTAGAGTTACAAGAGAATCCTATACTAAGTACCCTTCTTTCAAAGCTCGAGGTTACGTTAGTGGCTTCAGTAGGGGATTTGAAGAGAATATGCGAACTGGGATGGATAAAGAGGACTTTGCGACCTTCTTTTATACTTTCCAAAGAAGAGGGAAAGAACAGCCAGATGCCATATTTGACGTGATCAAATTCAGATGTCACCTTACCGCTGCTTCGGCTGAAACAGAGATGAGAGGATCCTCCCCAAACATCGTAGAACCTCGGTACCGGCCGTCGGCCTCAACTAATGAAGATACTAATAAGAGAAGATCTCAAAGAAGTAGATACTTCAAAGATGTTGAGAAGGCATTACACGCTCCATTTCAGGATAGGAGTATAAATTGCAAGCCCACCTGGAAAGTGGTTATGGTTGTTATTTTTTTAGGAACTCTAGTCACAATTTTCCATCCTCCAGCAATTTATGACACTGATCCTCTGTCAAACTCCATGTCCAGGCCATCTTTTGTTGACAAATGGAAAAGAGAGTTTGATACTACTGATCAGCGTTATGCTTCTCTTCTAAATGTTGAGTGGGGCCAAATATCAAAAGTTCTTGCAAAATTGACAGATATGAACACATATCAGGGAGTTGGTTTGTTGAACTTTAATGAAAGTGAGATTGACCACTGGAAACAGCTAATACCAGACGCTGAGCACATACTTCTTCATCTGAACTATGCTTCAAGTAACATAACATGGGAAGTCCTGTACCCTGAATGGATTGATGAAGAAGAAGAATTTGAAGTTCCTGTTTGTCCTACACTGCCAAAAATTCAAGTGCCTGGAAAACCAAGGCTTGATCTTGTTGCTGTCAAGCTTCCCTGCAACAAGTCAGGGAGATGGTCAAGAGATGTGGCTCGTTTGCACCTGCAGCTTGAGGCAGCAAGGCTTGCAGCCTCTTCCAAAGGGCATCATCCAGTGCATGTACTTTTTGTCACTGACTGCTTCCCTACCCCAAATCTCTTTACATGCAAGGAACTCATTCAACGTGAAAGTAATGCGTGGCTTTATGAACCTAAGCTGCACAGTCTGAGAGCTAAGCTACAGCTGCCAGTTGGATCATGCGAACTATCAGTTCCTCTTACCGCTAAAGAAAATTTTTACTCGGAAAGGGCACACCGAGAAGCTTATGCAACCATCCTGCATTCTGCACATGTGTATGTTTGTGGAGCCATTGTTGCTGCTCAGAGTATTCGCATGGCTGGTTCAACAAGAGATCTTGTGATTTTAGTAGATGAGTCAATTAGCGACTATCATAGGGGGGGCCTGGAGGCTGCTGGATGGAAGATTCATACTATCAAAAGAATCAGGAACCCAAAAGCTGAGCCAGAGGCATACAATGAGTGGAATTATAGCAAATTCCGCCTTTGGCAGCTAACAGAATATGACAAAATTATTTTCATCGATGCTGACCTGCTTATACTGAGAAATATCGATTTCCTCTTTGAGATGCCCGAGATATCAGCCATAGGAAATAATGCCACCCTTTTCAACTCGGGAGTAATGGTAATTGAACCATCACAATGTACATTTCAGTTGCTAATGGATCACATTGATGAGATTGTCTCCTACAATGGTGGAGACCAGGGGTATCTCAATGAAATATTCACATGGTGGCATCGGATTCCAAAACACATGAATTTTTTGAAGCACTTCTGGGAAGGCGATGAGGAGGAGAAAAAAGAGATGAAAACTCGTCTCTTCGGAGCTGATCCTCCAATTCTTTATGTCCTCCATTATTTGGGTAATAAACCGTGGCTTTGCTTCCGAGATTATGACTGCAACTGGAATGTGGACATTCTGCGGGAGTTTGCCAGTAATGTGGCTCATGCGACATGGTGGAAGGTTCATGATGCCATGCCAGGGAAGTTACAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCACAGTTAGAGTGGGATCGCAGACAAGCAGAGAAAGGGAACTATTCTGATGGTCACTGGAAAATTAAGATAAAAGACGAGCGTTTAAAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATACTTCGACAGCTACAAATTCAACACCTGCCATCACTACCTAA 2178 0.4302 MFFCSDSQPCCSRVTRESYTKYPSFKARGYVSGFSRGFEENMRTGMDKEDFATFFYTFQRRGKEQPDAIFDVIKFRCHLTAASAETEMRGSSPNIVEPRYRPSASTNEDTNKRRSQRSRYFKDVEKALHAPFQDRSINCKPTWKVVMVVIFLGTLVTIFHPPAIYDTDPLSNSMSRPSFVDKWKREFDTTDQRYASLLNVEWGQISKVLAKLTDMNTYQGVGLLNFNESEIDHWKQLIPDAEHILLHLNYASSNITWEVLYPEWIDEEEEFEVPVCPTLPKIQVPGKPRLDLVAVKLPCNKSGRWSRDVARLHLQLEAARLAASSKGHHPVHVLFVTDCFPTPNLFTCKELIQRESNAWLYEPKLHSLRAKLQLPVGSCELSVPLTAKENFYSERAHREAYATILHSAHVYVCGAIVAAQSIRMAGSTRDLVILVDESISDYHRGGLEAAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTEYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVIEPSQCTFQLLMDHIDEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEKKEMKTRLFGADPPILYVLHYLGNKPWLCFRDYDCNWNVDILREFASNVAHATWWKVHDAMPGKLQKFCLLRSKQKAQLEWDRRQAEKGNYSDGHWKIKIKDERLKTCFEDFCFWESMLWHWGEKNWTDTSTATNSTPAITT 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0219 725 MobiDBLite consensus disorder prediction 86 117 - -
Lele26g0219 725 FunFam Hexosyltransferase 396 648 - -
Lele26g0219 725 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 396 645 IPR029044 -
Lele26g0219 725 SUPERFAMILY Nucleotide-diphospho-sugar transferases 399 649 IPR029044 -
Lele26g0219 725 Pfam Glycosyl transferase family 8 405 611 IPR002495 GO:0016757
Lele26g0219 725 PANTHER GLYCOGENIN SUBFAMILY MEMBER 307 691 - -
Lele26g0219 725 CDD GT8_Glycogenin 399 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0219 Lele-ChrLele26 1266385 1273253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0219 90 707 Glycosyltransferase AT1G77130 69.231 0.0 878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0219 26 1266385 1273253 Lele27g1877 27 23491595 23495325 hybridization
Lele26g0219 26 1266385 1273253 Lele28g0228 28 1322606 1328160 hybridization