Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0199 ATGAAGACTCCGACCACTCACCCCGTTTCCCAACCTCCTCAAATGCCTTTGTTTCGCAAATCATCATCTTCTCCCTCTCCCACCCCCTCCACGCCTTCATCTATTTCTCCTTCTTCCCTCAAACAAACTGACGTCGATGCCGCTGGTGATGTCGCTAGTCCCGTTCACAGCTCGGACCAATCAACTCCCCGCCGCCGCCGCCTTACTCGAGCCAGGAAGCTTCGCCACCTTACCGACCATGATGTTGGCCTGCACCTCCCTGACGATTCTTCTCTCCCGGCTTCCCCTCCGTCCTCTCGCAAGTCTCGCTCATCGGGTGGTTCCGAGCACTGGTCCTCCTCTGCCTTGCCTCAACCCCTGCCGCTTCCCGAATCACCGTTGACTCGCCGACCGGAGTCTACCGTTCCTAATCCCGGACGGTTCCAGCTCGGATCTCCTTCCGTAGACCATTCGGGATTTGCTTTCGGGAGGAAGACTGTGGATCATGATGCATTCATAGACATGAAGTCTTGGAGCCATATGGGTAGATCTTGTGATCCAACATCTGCAAACGCGAAGTTTAATCTGAGAGTAAACATCCCGGTCAAAATTCATGTAAAGATCGAGCAATCTCTCATGATATGGACTCTGAAAGTATTTGACTCAAGATTGCATGTGGCCATAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTACCAGTCCGCGGAGATCAAGCAATGTAGATTTCACTGATCATTTCATTAGTACTCAAGAATTTCATGACAACCCTGTTGGCCATCCTCCAAAAGTGTCACCACACTTGAATGTTCAAAGTCCAGATCTTTCTTCTTTCCGTAGCCCAGGGCGCCATAGTCCTTTCCTCAATCTCAAAATCCAAGATGGATGTCAGCATAGATTTCATTCCAGGGCATGGCCAGAAAATAACCATGCCGATGCACATCCTTTACCTCTTCCTCTTCCTCCTGGAGGTTCACCACCAGCACAATCATCTGTGCAGTGTCAATCAAGTGCCATGCATCACTCATTTGAAAGTCAATTTTCAGGGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGGGGCACTTTTGGAAGTGTTTATCATGCAACAAACCTAGAGACTGGTGCGTCATGTGCAATGAAGGAGGTGGATATCATTCGAGATGACCCTAACTCTGCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACACCATCCAAATATTGTGCAATATTATGGCAGTGAAATAGTTGGTGATCACTTGTGCATTTATATGGAGTATGTTCATCCAGGGTCAGTCGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAATTCGCAATTTTACACGGCATATTCTCTCAGGGTTGGCTTACTTGCACAGTACCAAAACTATCCACAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCGTCAGGCACCGTCAAGCTTGCTGATTTTGGAATGGCAAAAGTTCTAACAGGGCAATCATATGCCCTCTCCTTAAAGGGCAGTCCATACTGGATGGCTCCTGAGGTCATGAAGGCTGCCATGATGAAAGATGACAATCCTTACCTTGTCTATGCTATTGATATCTGGAGCCTAGGTTGCACTATCATAGAGATGCTGACAGGAAAACCTCCCTGGAGTGACTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCACCGATACCAGAAACATTATCTTCAGCAGGAAAGGATTTTCTTCAGAGATGTTTTGAAAGGGATCCTGCAAATCGACCATCAGCTGCAAGGCTTCTTGAGCACGCCTTTGTTCAAAATTTGCATGATCAGGATGCTTTAGCTCACCCACGATCATATCCTAGGGAAGACCCTGAAGATAATTCACGTAGTCCCAAAGACACCACTACACAGAACCGTGATGTGATTCGAGCCTCCATGGGCGCCCGGTTCATCAACAAAATCCAGAAACTGATCGGTGATTCTTCCCAACAGTATAATGCTGAGGATTCTAAATATTCTACATCTCATTACGCTCCTTACTCTCTGCCAGAAGTTAAAATTCCTCAGTCGTCCTTGAAACCAGCTGCCCTCAATTACGTCTCTGCTTCAAAATCCAGCAACATAGTCCCTCGCTGTAATGAGATTCGTCACGCACCTTTCATTCCATCTTATTTACCTTCGTGGAGGCTGGGATTTACAAGCTGCTCATTCATGGTCAGAAATATGCCAATCTCAAGGGGCAATAGAGAGCGAAAAGTTCACATCGACTTGTACCAATAA 2313 0.4687 MKTPTTHPVSQPPQMPLFRKSSSSPSPTPSTPSSISPSSLKQTDVDAAGDVASPVHSSDQSTPRRRRLTRARKLRHLTDHDVGLHLPDDSSLPASPPSSRKSRSSGGSEHWSSSALPQPLPLPESPLTRRPESTVPNPGRFQLGSPSVDHSGFAFGRKTVDHDAFIDMKSWSHMGRSCDPTSANAKFNLRVNIPVKIHVKIEQSLMIWTLKVFDSRLHVAIKSAPTSVFSSPVTSPRRSSNVDFTDHFISTQEFHDNPVGHPPKVSPHLNVQSPDLSSFRSPGRHSPFLNLKIQDGCQHRFHSRAWPENNHADAHPLPLPLPPGGSPPAQSSVQCQSSAMHHSFESQFSGKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDIIRDDPNSANCIKQLEQEIKILRQLHHPNIVQYYGSEIVGDHLCIYMEYVHPGSVDKFVRANGEAMTESVIRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKVLTGQSYALSLKGSPYWMAPEVMKAAMMKDDNPYLVYAIDIWSLGCTIIEMLTGKPPWSDFEGPQAMFKVLHNSPPIPETLSSAGKDFLQRCFERDPANRPSAARLLEHAFVQNLHDQDALAHPRSYPREDPEDNSRSPKDTTTQNRDVIRASMGARFINKIQKLIGDSSQQYNAEDSKYSTSHYAPYSLPEVKIPQSSLKPAALNYVSASKSSNIVPRCNEIRHAPFIPSYLPSWRLGFTSCSFMVRNMPISRGNRERKVHIDLYQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0199 770 MobiDBLite consensus disorder prediction 15 43 - -
Lele26g0199 770 MobiDBLite consensus disorder prediction 92 115 - -
Lele26g0199 770 FunFam Mitogen-activated protein kinase kinase kinase 5 351 652 - -
Lele26g0199 770 MobiDBLite consensus disorder prediction 625 644 - -
Lele26g0199 770 Gene3D Transferase(Phosphotransferase) domain 1 348 689 - -
Lele26g0199 770 ProSiteProfiles Protein kinase domain profile. 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0199 770 MobiDBLite consensus disorder prediction 308 333 - -
Lele26g0199 770 Pfam Protein kinase domain 355 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0199 770 SMART serkin_6 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g0199 770 MobiDBLite consensus disorder prediction 1 147 - -
Lele26g0199 770 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Lele26g0199 770 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 628 - -
Lele26g0199 770 MobiDBLite consensus disorder prediction 621 650 - -
Lele26g0199 770 SUPERFAMILY Protein kinase-like (PK-like) 352 657 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0199 Lele-ChrLele26 1174590 1179257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0199 217 617 MAP Kinase Kinase Kinase AT5G66850 55.093 7.54e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele26g0199 Pkinase 7.9e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0945 01 5453411 5455573 Lele26g0199 26 1174590 1179257 CCT
Lele02g0947 02 5740719 5742932 Lele26g0199 26 1174590 1179257 CCT
Lele03g0942 03 5470399 5472958 Lele26g0199 26 1174590 1179257 CCT
Lele04g0939 04 5783040 5785213 Lele26g0199 26 1174590 1179257 CCT
Lele26g0199 26 1174590 1179257 Lele27g1892 27 23590018 23594958 hybridization
Lele26g0199 26 1174590 1179257 Lele28g0204 28 1195792 1200496 hybridization