Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0196 ATGGCTGTCCGGGTTACTTTTAGCTATTCTGGCTATGTCGCCCGGAGCTTGTTTTCGTCGGTCGTTACTCGAGTTTCCTCTACCCCTTGCTTCCAGGAATGCTGGATCTGGTCTCGCATATTTTGTCCTGGCCAACAGAAGCATGATGTTGATTCCTCCTCCCCTTGCAGCGTGCATAGTTACCATTCCGATTACGGGCGGCCCAGATACAATTGCTGTGTCCAGAATTTAGCACCTACGTATACGACTCTCGCAGCGGGAATTCTGGGTGATAATTCTAAAAACCCGTTCATTTCGGGTTTGATTTCGATGATGAGTTCAACTGTTTGTGTATCTGGTTCATGTGGCGTGGGTACGGTTGTTTGTGAGGATGCGAAAGCTGTGTTTACTGCCGCTACTTTTAGTATTCTCTTCCGATCGTTCTTGGCTGAACCGAGATCGATTCCCTCGTTCTCAATGTACCCAACTCTAAATGTAGGTGACCGTATTTTGGCGAAGAAGGAAATCGGTTATTATTCAGGTGATGTGTTTATAAAAAGAATTGTGGCTAAGGCAGGGGACTGTGTTGAGGTTCTTGATGGAAAGTTACTGGGGAATGGTATTGTGCAAGAAGAAGAGTTCATTTTGGAGCCACTCTCTTATGAGATGGATCGGCGGGTTGTGCCCGAAGGTTATGTCTTTGTGATGGGAGACAATCGCAATAACAGCTTTGATTCCCATAACTGGGGTCCGCTACCTATCAAGAACATTGTTGGTAGATCCATGTTTCGATACTGGCCTCCATCCGAAGTATCTGAGACTTGCAAGGATGTTTTAAAGAATATTTCAGCAAGCGAGAACTGGAATTTGAAGGCTGTAAGAATTTCCGAGTTGGACGCTGGGGAGGCGAGGTTTGGCACCTTCCGGACCTATGAATTCTCTGTTGAGTTGGGCAAGAGCCACTTTGGCTCTATCAATTTCTCGGACGACTTTGTGCCTTGGCGCAAATTTAGAAAACCCAAATCCGATTTATACTCTGTCATTCATGGAACAACTTCCCGGGCCGTACTGGATACCTTGGAAATTGAAGGTCCACTTGAGTTATGA 1086 0.4604 MAVRVTFSYSGYVARSLFSSVVTRVSSTPCFQECWIWSRIFCPGQQKHDVDSSSPCSVHSYHSDYGRPRYNCCVQNLAPTYTTLAAGILGDNSKNPFISGLISMMSSTVCVSGSCGVGTVVCEDAKAVFTAATFSILFRSFLAEPRSIPSFSMYPTLNVGDRILAKKEIGYYSGDVFIKRIVAKAGDCVEVLDGKLLGNGIVQEEEFILEPLSYEMDRRVVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSMFRYWPPSEVSETCKDVLKNISASENWNLKAVRISELDAGEARFGTFRTYEFSVELGKSHFGSINFSDDFVPWRKFRKPKSDLYSVIHGTTSRAVLDTLEIEGPLEL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0196 361 ProSitePatterns Signal peptidases I signature 3. 226 239 IPR019758 GO:0004252|GO:0016020
Lele26g0196 361 PRINTS Bacterial leader peptidase 1 (S26A) family signature 221 240 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele26g0196 361 PRINTS Bacterial leader peptidase 1 (S26A) family signature 141 157 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele26g0196 361 PANTHER SIGNAL PEPTIDASE I 122 167 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele26g0196 361 TIGRFAM sigpep_I_bact: signal peptidase I 127 260 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele26g0196 361 Gene3D Umud Fragment, subunit A 138 276 - -
Lele26g0196 361 CDD S26_SPase_I 144 253 IPR019533 GO:0004252|GO:0006465
Lele26g0196 361 SUPERFAMILY LexA/Signal peptidase 139 264 IPR036286 -
Lele26g0196 361 ProSitePatterns Signal peptidases I serine active site. 150 157 IPR019756 GO:0004252|GO:0016020
Lele26g0196 361 Pfam Signal peptidase, peptidase S26 125 259 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0196 Lele-ChrLele26 1152110 1156475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0196 153 260 MADS-box Gene Family AT1G29960 33.333 3.26e-09 52.8