Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0191 ATGGCATGCCGGGACTGTGAGGCGAACTTAAATGCGAGGAGGCCTCACTTCTACGAGCTTTATTCCTCCACATCGAGTTCCGAGAGACTGAGAATTCCTGCTGGATTCAGCCATTGCATGCAAGGTAGGACGTCTGGTTTAGTCTCATTGACAGGTCCTAGCGGAAATACTTGGCATGTTCAATTGGTTAAGGAGGGGAATGATATATTCCTCCATCATGGATGGCCGACATTTTTGGAAGATCATGTTGTAGAAGTTGGTGACCTTTTGGTTTTCAGATATGAGGGTCACTTACACTTCACTGTGCTAGTCTTTGATCAGAGAGCATGTGAGAAAGAAGCAGCATTTATATCTAAATGCAGTCAAAATTCATGTGAACTCAATCATATTAATGCACATAAAAGAAATAGGGAGGATAATTGTTCTTTGAATGTTGTTGCTGAAGGCTTGACGAAGAAAATGAAAGTGAGTGCCTTTGAGAACCAGGAACTTAGGACGAGTATAGTTAGTAAAGATTCATCCTTGTTTGAGTGGGTAAAACCGATTAATATGTTCAGAGAAAAAGGAGGATCCTCCAAAGAAGATGCACAACTTAGATGCCCAGATGGTAATGTTGCTGTGCCTTCTCAAATGGAATATAGCAACGAATGTGAAGAGGCTGCTATGCAGATTGGAAGTGGGAAAGAAGATGATCAATATATGCATAGTAGAGTTTGTCTGTCAAAGTTATCGTCATACGATGAGAAAAGAGTAGCTCAATTGTTTACGTCCTCTTTCCCGTATTTTGTGAGAATCATGAAAAGCTTCAACATCAGTGGTTCATATACTCTGAATATCCCGTATCAATTTTCAATGGCACATCTTCCAAACTGCAAGATAAAGATCATCCTTCATAATATAAAAGGGGAGCATTGGACTGTTAATTCTGTGCCAACAACAAGAGTACATACAAGTCACACTCTCTGTGGTGGGTGGATGGCTTTTGTTCGTGACAATAACATTAAGGTTGGAGATATCTGCATCTTTGAACTTGTGCATGAGTGTGAATTACGTGTCTGCATTGTTGGAGTAGGAAAAGATGGGACAGACTGTCAGGTTGGGAATGTAGCTTTTAGTAGGTCTCTTACAGGACATTCCTTCAATTCCCATAGAACTTCTCAATATGTGCCGATCAAGGCTAAAGTCAACCCAAAGTGCAATGGAAATGTTGATCTATCTGATAAAAAGCCGTCACGGATGAGTCAAGATGCTGTTTTGTCTATGGATAAAAAGAAACCTGTCAGAGTGTCGAAGGATTCTAAGAAAACAGGGATTTTCCCTCAGTCAAAAGCTGCCCATAATAAGTTGGCTGTTCAGAGAAGACATCGAACCGAAGATGAACTAAGCTCACAGGCTAAAGCTGGTTTGAGAATGCTGTTTGCACTTGACGAACAAAGAGCAGCTCAGGCCTTCACATCCTCATTTCCTAGTTTTGTAAAAGTCATGAAAAAGTTCAACGTCAGCGGATCATACACTTTGAAGATCCCATATCAATTCTCTGCAGCGCATCTCCCATCCTACAAAACAGAAGTTGTGCTCCGTAATTCAAGAGGTGAATGTTGGACTGTGAACTCTGTTCCGGACACAAAAGGCAGAGCAGTGCTCACGTTTTGTGGGGGATGGATGGCCTTTGTCCGTGATAATGACATCAATTTTGGAGACACGTGCATTTTCGAACTTGTCGCTCAGTATGAAATGCAAGTTTATATTTGTGGTATTGCTAAGGAAGGGTTTGACCATCAGAACAGGGAACCAAAATCTAGTAGACTAGCTTTAGTTCCATCTACCATTGTCATGGCAAACATGGTGGAACCTGTTGGGATCTTCATCCTCATTCTAGATGAGGTGTCTATGGATGGCTTCGACAGTGAATTCCTGGAGCTCGCGAGCTGCTTCGACTCCCAGGCCTACCCGGGCCCTGCGCGATCTGTGTCAGCTGAAATGGGAGAAAATTGTGAAAGCTGTAGATCATGGGTAGACGACATTTACTGGACCCGTTTCCAATTCTTCCATTTTGCCCACTTTCTTCCCAAGGGCTTTGATCGACAGCTTGCACTGCCCAAGAATTTTTCAGATAATTTGAGGACGAAATTGCCAGATAATGTGACTCTGAAAGGTCCTGGTGGCGATGAGTGGAGTGTTGGATTGACTACCAGAAATGATACCTTGCACTTCACGCATGGCTGGCAACAATTTGTTAAAGATCACTGTTTGGAAGAGAATGATCTGCTGGTCTTCAAGTACAATAACGAATCGCAGTTTGACGTTCTAATATTTGGCCAGGGGAGCTCCTGTGAGAAGGCTGCTTCTTTCTTTGTTAGGAAATGTGGGCATACAAGTAAGAGAATCAGATACAACCGTTTGGAAGAGGTCAATTTCCCTTCTAATGTTCGCACTGAGCATGCTTTACCTGGGAAGTTTGTGCGTGGTGAGAGTATCGGAGTGCCGATCATCGTCCCCTCTGAAATTAGTAGTAAAGAAGCCTGTGATGCTGGTGTGGAATTTGCCTCCCCTGTGACAGCAATTCCAATGGCCGCAACGGATGTCCAAACTAAGCGGAGAGGAGGAACCAAAGGATCTAAAGCACGTGGGGGCAGAGCTAACTTGATTGCTGATGTTGAACCCTCATCTGCGATCAGAAATAAGACGAATGAATTATATATTTCAAACAGAAGGCCTGTCACAGAAGATGAGAAGTCAACTACCCTCCAATTAGCTCAGGCAGCGTGTACTGACAAGGGTTTCTACATAATCATGCGTCCCACACATGTATACAAGAGATTCTATGCGTCAATCCCTAGCAAGTGGTTAGCGGAACATCTTTCGCCTCACTCTGAAGATGTGATATTGCGCATGGGAGGGAATGAATGGCATGCGAGATACAGCTTTGAACACGGTCGTCGAACTGGAGGACTCACTGGTGGATGGAAACACTTCGCTCTGGACAATAACCTCGAAGAATTTGATGTATGTGTGTTCGAACTAGTAGGTCAAAGCAAGCCATTGATCATTGATGTGACAATATTCAGAGTTATTGAGGAGTTTACACCTCTGGGTAATGCGAGTTCTGGTGGAAAAGGAGACCCAAATGGCATCCAATCATGGGAAGTCTGA 3153 0.4336 MACRDCEANLNARRPHFYELYSSTSSSERLRIPAGFSHCMQGRTSGLVSLTGPSGNTWHVQLVKEGNDIFLHHGWPTFLEDHVVEVGDLLVFRYEGHLHFTVLVFDQRACEKEAAFISKCSQNSCELNHINAHKRNREDNCSLNVVAEGLTKKMKVSAFENQELRTSIVSKDSSLFEWVKPINMFREKGGSSKEDAQLRCPDGNVAVPSQMEYSNECEEAAMQIGSGKEDDQYMHSRVCLSKLSSYDEKRVAQLFTSSFPYFVRIMKSFNISGSYTLNIPYQFSMAHLPNCKIKIILHNIKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRDNNIKVGDICIFELVHECELRVCIVGVGKDGTDCQVGNVAFSRSLTGHSFNSHRTSQYVPIKAKVNPKCNGNVDLSDKKPSRMSQDAVLSMDKKKPVRVSKDSKKTGIFPQSKAAHNKLAVQRRHRTEDELSSQAKAGLRMLFALDEQRAAQAFTSSFPSFVKVMKKFNVSGSYTLKIPYQFSAAHLPSYKTEVVLRNSRGECWTVNSVPDTKGRAVLTFCGGWMAFVRDNDINFGDTCIFELVAQYEMQVYICGIAKEGFDHQNREPKSSRLALVPSTIVMANMVEPVGIFILILDEVSMDGFDSEFLELASCFDSQAYPGPARSVSAEMGENCESCRSWVDDIYWTRFQFFHFAHFLPKGFDRQLALPKNFSDNLRTKLPDNVTLKGPGGDEWSVGLTTRNDTLHFTHGWQQFVKDHCLEENDLLVFKYNNESQFDVLIFGQGSSCEKAASFFVRKCGHTSKRIRYNRLEEVNFPSNVRTEHALPGKFVRGESIGVPIIVPSEISSKEACDAGVEFASPVTAIPMAATDVQTKRRGGTKGSKARGGRANLIADVEPSSAIRNKTNELYISNRRPVTEDEKSTTLQLAQAACTDKGFYIIMRPTHVYKRFYASIPSKWLAEHLSPHSEDVILRMGGNEWHARYSFEHGRRTGGLTGGWKHFALDNNLEEFDVCVFELVGQSKPLIIDVTIFRVIEEFTPLGNASSGGKGDPNGIQSWEV 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0191 1050 SUPERFAMILY DNA-binding pseudobarrel domain 255 356 IPR015300 -
Lele26g0191 1050 SUPERFAMILY DNA-binding pseudobarrel domain 928 1016 IPR015300 -
Lele26g0191 1050 MobiDBLite consensus disorder prediction 418 432 - -
Lele26g0191 1050 CDD B3_DNA 489 584 IPR003340 GO:0003677
Lele26g0191 1050 SUPERFAMILY DNA-binding pseudobarrel domain 682 773 IPR015300 -
Lele26g0191 1050 SUPERFAMILY DNA-binding pseudobarrel domain 484 585 IPR015300 -
Lele26g0191 1050 Pfam B3 DNA binding domain 491 584 IPR003340 GO:0003677
Lele26g0191 1050 Pfam B3 DNA binding domain 928 1015 IPR003340 GO:0003677
Lele26g0191 1050 Pfam B3 DNA binding domain 22 107 IPR003340 GO:0003677
Lele26g0191 1050 Pfam B3 DNA binding domain 694 771 IPR003340 GO:0003677
Lele26g0191 1050 Pfam B3 DNA binding domain 266 354 IPR003340 GO:0003677
Lele26g0191 1050 ProSiteProfiles B3 DNA-binding domain profile. 682 775 IPR003340 GO:0003677
Lele26g0191 1050 CDD B3_DNA 260 354 IPR003340 GO:0003677
Lele26g0191 1050 SUPERFAMILY DNA-binding pseudobarrel domain 11 110 IPR015300 -
Lele26g0191 1050 SMART B3_2 491 587 IPR003340 GO:0003677
Lele26g0191 1050 SMART B3_2 17 108 IPR003340 GO:0003677
Lele26g0191 1050 SMART B3_2 262 358 IPR003340 GO:0003677
Lele26g0191 1050 SMART B3_2 928 1025 IPR003340 GO:0003677
Lele26g0191 1050 SMART B3_2 685 775 IPR003340 GO:0003677
Lele26g0191 1050 MobiDBLite consensus disorder prediction 405 435 - -
Lele26g0191 1050 ProSiteProfiles B3 DNA-binding domain profile. 928 1025 IPR003340 GO:0003677
Lele26g0191 1050 Gene3D - 8 110 IPR015300 -
Lele26g0191 1050 Gene3D - 678 778 IPR015300 -
Lele26g0191 1050 CDD B3_DNA 692 772 IPR003340 GO:0003677
Lele26g0191 1050 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 691 1025 IPR044837 -
Lele26g0191 1050 CDD B3_DNA 22 106 IPR003340 GO:0003677
Lele26g0191 1050 ProSiteProfiles B3 DNA-binding domain profile. 15 108 IPR003340 GO:0003677
Lele26g0191 1050 CDD B3_DNA 928 1023 IPR003340 GO:0003677
Lele26g0191 1050 ProSiteProfiles B3 DNA-binding domain profile. 491 587 IPR003340 GO:0003677
Lele26g0191 1050 ProSiteProfiles B3 DNA-binding domain profile. 262 358 IPR003340 GO:0003677
Lele26g0191 1050 Gene3D - 244 357 IPR015300 -
Lele26g0191 1050 Gene3D - 906 1027 IPR015300 -
Lele26g0191 1050 Gene3D - 476 586 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0191 Lele-ChrLele26 1118925 1128727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0191 29 120 REM Transcription Factor Family AT4G33280 40.000 1.94e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele26g0191 B3 4.9e-13 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0191 26 1118925 1128727 Lele28g0196 28 1148646 1152079 hybridization