Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0189 ATGAGGTGGACCACAACTCTCCACGCCCAGTTTGTTCGTGCTGTTCATCTCCTTGGCGGTCATGAAAGGGCTACTCCGAAGTCTGTATTAGAGTTAATGAATGTTAAGGATCTAACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACCGACAAAGGGACAGGTCATGGGCAGACAGATATGGGTTTGAACCAAAGGCCACCAGCAGAGAACAATGCAGATGTGCATGGAGCTTCAGCCTGTAAGGGAGCCCGTTTATTCCCACAATCGCTCCACAAATCCCTCAGAGCATCGTGGCAATCGTCAATGGAGACAAATAAAAATGACAGTAGACAAAAATCCCAAATTGATTGGACTCATTCTCATGATCTCAATACAAAGGAAACAAAGGTGGATGGAGGTAACAGAGGAGTGTGGAATTGCGTGGAGGAGAGATTGGATTGTAGCAATTTGTCACGTTCGGATATGACGCTTGACCTAGAATTCTCACTTGGAAGACCCACTTGGCAAACAAATCTTCAGAAGACCTAG 549 0.459 MRWTTTLHAQFVRAVHLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDMGLNQRPPAENNADVHGASACKGARLFPQSLHKSLRASWQSSMETNKNDSRQKSQIDWTHSHDLNTKETKVDGGNRGVWNCVEERLDCSNLSRSDMTLDLEFSLGRPTWQTNLQKT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0189 182 FunFam Myb family transcription factor 1 55 - -
Lele26g0189 182 Gene3D - 1 55 - -
Lele26g0189 182 MobiDBLite consensus disorder prediction 55 72 - -
Lele26g0189 182 MobiDBLite consensus disorder prediction 55 82 - -
Lele26g0189 182 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 178 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele26g0189 182 MobiDBLite consensus disorder prediction 116 135 - -
Lele26g0189 182 MobiDBLite consensus disorder prediction 103 135 - -
Lele26g0189 182 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 1 52 IPR006447 GO:0003677
Lele26g0189 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Lele26g0189 182 Pfam Myb-like DNA-binding domain 1 51 IPR001005 -
Lele26g0189 182 SUPERFAMILY Homeodomain-like 1 53 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0189 Lele-ChrLele26 1104981 1106861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0189 1 78 G2-like Transcription Factor Family AT5G42630 75.949 2.42e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele26g0189 Myb_DNA-binding 1.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0189 26 1104981 1106861 Lele02g0874 02 5309448 5311604 CCT
Lele26g0189 26 1104981 1106861 Lele03g0891 03 5172576 5174746 CCT
Lele26g0189 26 1104981 1106861 Lele04g0888 04 5469363 5471543 CCT
Lele26g0189 26 1104981 1106861 Lele27g1903 27 23653294 23656083 hybridization
Lele26g0189 26 1104981 1106861 Lele28g0192 28 1118079 1120382 hybridization