Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0180 ATGACTTCCATATCTTCCCTTACAGCTTCCTTCTCCTCTCTCTCGTTCTCCTCCCATATGTCCAAGAAACTGCACGGCCTCTCTTTTGGAAGAACCCAGTCCATCTCAATCTCCCACGTGTCCCGAATCCCCTTGCTGGTTGCATCCGCCGCTGTCGCATCTCCGGCGGAATTGGAAACGGCTGACCTGAAGAAATACGTAAAATCCAGGCTTCCTGGGGGTTTCGCTGCTCAAACAATCATAGGCACCGGTCGCCGAAAAAGCGCCATTGCTCGGGTTGTTCTCCAGGAAGGAACTGGCAAATTCATTATCAATTCCCGTGACGCCAAGGAATATCTTCAGGGAAACCCATTGTGGCTTCAGTACATTAGGGTCCCATTAATAACTTTGGGATATGAAAATAGTTATGATGTATTTGTCAAAGCTGAGGGCGGTGGCCTCTCTGGTCAGGCTCAAGCAATCTCCCTTGGCATTGCTCGGGCCTTGCTAAAGGTGAGCGAAGATCATAGATCGCCTCTGAGACAGGAAGGGCTCTTGACCAGAGATTCAAGAGTGGTTGAGAGGAAGAAAGCTGGTCTGAAGAAAGCTCGTAAAGCTCCCCAGTTTTCAAAACGTTAA 618 0.4935 MTSISSLTASFSSLSFSSHMSKKLHGLSFGRTQSISISHVSRIPLLVASAAVASPAELETADLKKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINSRDAKEYLQGNPLWLQYIRVPLITLGYENSYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRSPLRQEGLLTRDSRVVERKKAGLKKARKAPQFSKR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0180 205 PANTHER RIBOSOMAL PROTEIN S9 53 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele26g0180 205 SUPERFAMILY Ribosomal protein S5 domain 2-like 79 205 IPR020568 -
Lele26g0180 205 FunFam 30S ribosomal protein S9 75 205 - -
Lele26g0180 205 Pfam Ribosomal protein S9/S16 84 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele26g0180 205 Hamap 30S ribosomal protein S9 [rpsI]. 75 205 IPR023035 -
Lele26g0180 205 ProSitePatterns Ribosomal protein S9 signature. 144 162 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lele26g0180 205 Gene3D - 71 205 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0180 Lele-ChrLele26 1058327 1059978 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0180 26 1058327 1059978 Lele27g1911 27 23690058 23691689 hybridization
Lele26g0180 26 1058327 1059978 Lele28g0183 28 1074657 1076304 hybridization