Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0172 ATGGTTCGGTGTAGTCCCTGCAGTCGGTCCAGATTTGATTGTACGCTTCGATTCGCCGTCGTCGTGTTCGAGATTCTATTGATAGTGGCATGTTCGGAGGCCACATATGCAATACCTCGAGAACACCAACTTCAATCTGGAGGCCTGGGAAGAAGAAGTGAAAACATTGCATCGCACTCTTGCATCCATGATCAGATACTTGAACAGAGAAGGCGACCTGGTCGCAAGGTGTATTCCATTACCCCACAGGTTTATGATCCTGGCCTTCCAAAAGTCCTTCAGCATAAAGGCAGGTCATTACTCGGAGTGTCAACACCATCAGGGCCTCAAAATGATGCAAAACAACCTATTAGAATATATCTTAATTATGATGCCGTGGGCCACTCGCCTGAGAGAGATTGTCGAAAAGTGGGTGATATCGTCAAACTTGGAGAGCCTTCAATGACGGCCCCTCCTGGTTTCCCTGCTTGTAATTCTCATGGTGATCCTCCAATTTTGGGGGATTGTTGGTACAACTGCACCACGGAAGATATTTCAGGAGAGGACAAAACGGGTCGCCTTCGCAAGGCATTGGGCCAGACAGCCAATTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGAAACTTGCGATTAAGTGGATATTCTGCTTGTGGACAAGATGGAGGCGTGCAACTTCCCCGTGAATATGTTGAGGAGGGTGTGTCTGATGCTGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGGAATACACTTGCTTGGGCAGTGGCATGCGAAAGGGATCAATGGGGCCGTGCCATAGCTGGACATGTAAATGTTGCTCCTCGCCATTTGACAGCTGAGGCTGAGACTTTGCTGTCAGCTACTCTGATACACGAGGTTATGCATGTTCTTGGTTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAAACGTCGCAATCAGGTTACTGAACAGGTCGTGGATGACAGACTTGGGAGGATGGTAACCCGTGTGGTACTTCCACGAGTTGTCACGTATGCACGACATCACTATGGGGCATTCTCAGAAAATTTTACTGGTTTAGAGCTGGAAGATGGGGGAGGACGTGGTACATCAGGATCCCACTGGGAAAAAAGGCTTTTGATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCCGTAGTTTCAAAAATGACACTTGCTCTCTTGGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGATAATCTTGATTGGGGTCGCAACCAAGGTACCGAGTTTGTTACCTTCCCTTGCAATCTCTGGAAGGGTGCCTATCATTGCAACACAACACAGTTGTCTGGTTGTACATATAATAGGGAGGCAGAAGGATACTGCCCAATTGTAACCTATAGTGGAGAACTCCCTCAATGGGCTCGATATTTTCCGCAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTACTGCACTTATTTTGTTGCATACTCCGATGGATCTTGCACAGACACCAGTAGTGCAAGGGCACCTGATAGAATGCTGGGTGAAGTCCGAGGGAGTAACTCTAGGTGTATGGCCTCGTCATTAGTACGAACAGGATTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAATAATTCTTTAGAGGTTGCTGTGGACGGTGTCTGGAAATTATGCCCTCAAGCTGGTGGACCCATTCAGTTCCCTGGATTTAATGGCGAATTGGTCTGCCCTGCATATCATGAGCTCTGTACCACAAACCCTGTTGATGTACCTGGGCAGTGCCCCAGTTCTTGTAATTTCAATGGAGACTGTATTGATGGAATGTGCCACTGCTTTCTAGGATTTCATGGTCATGATTGCAGTAGGCGCTCCTGCCCCAGGAATTGCAATGGCAATGGCAAGTGCCTCTCCAATGGAATTTGTAAATGTAAAGATGGCTATACTGGCATTGACTGTTCCACCGCTGTTTGTGATGAGCAATGCAGCCTCCATGGTGGGGTTTGCGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCGGGATACACATGCCAGAACAGCTCCATGCTCCTCTCTAGTTTGTCAGTTTGTAAAAATGTGCTGGGAAAGGACGTGTATGGACAGCATTGTGCACCTAGTGAACCAAGTATCCTGCAGCAGTTAGAAGAAGTAGTTGTAATGCCCAACTACCACCGACTATTTCCTGGTGGTGCTAGGAAATTATTCAACATATTTGGCAGCACTTACTGCGATGAGGCTGCTAAACAACTAGCCTGCTGGATCTCAATCCAAAAGTGTGATGAGGATGGTGACAACCGGCTCAGGGTATGCCATTCAGCGTGTCAGTCATATAATATGGCGTGTGGAGCTTCACTTGACTGCTCTGACCAGACCTTGTTTAGCAGTGAAGGGGAAGGTAAGGGCCAGTGTACGGGCTCTGGTGAGATGAAAATGTCTTGGATTAATCGACTGCGAACTACATTTTCTTTGAGGAAAGGTTCCTTGAAAGGAGTTGGTGTAAAATATAGGCAACTTTAA 2574 0.4666 MVRCSPCSRSRFDCTLRFAVVVFEILLIVACSEATYAIPREHQLQSGGLGRRSENIASHSCIHDQILEQRRRPGRKVYSITPQVYDPGLPKVLQHKGRSLLGVSTPSGPQNDAKQPIRIYLNYDAVGHSPERDCRKVGDIVKLGEPSMTAPPGFPACNSHGDPPILGDCWYNCTTEDISGEDKTGRLRKALGQTANWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKKRRNQVTEQVVDDRLGRMVTRVVLPRVVTYARHHYGAFSENFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADNLDWGRNQGTEFVTFPCNLWKGAYHCNTTQLSGCTYNREAEGYCPIVTYSGELPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGVWKLCPQAGGPIQFPGFNGELVCPAYHELCTTNPVDVPGQCPSSCNFNGDCIDGMCHCFLGFHGHDCSRRSCPRNCNGNGKCLSNGICKCKDGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGKDVYGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKQLACWISIQKCDEDGDNRLRVCHSACQSYNMACGASLDCSDQTLFSSEGEGKGQCTGSGEMKMSWINRLRTTFSLRKGSLKGVGVKYRQL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0172 857 Gene3D Leishmanolysin domain 4 499 594 - -
Lele26g0172 857 FunFam Peptidase M8, leishmanolysin 110 300 - -
Lele26g0172 857 Gene3D Laminin 635 666 - -
Lele26g0172 857 Gene3D Laminin 604 633 - -
Lele26g0172 857 ProSitePatterns EGF-like domain signature 1. 652 663 IPR000742 -
Lele26g0172 857 ProSiteProfiles EGF-like domain profile. 632 664 IPR000742 -
Lele26g0172 857 ProSitePatterns EGF-like domain signature 2. 652 663 IPR000742 -
Lele26g0172 857 FunFam leishmanolysin-like isoform X2 499 594 - -
Lele26g0172 857 Pfam Leishmanolysin 59 597 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele26g0172 857 FunFam leishmanolysin-like peptidase isoform X2 311 435 - -
Lele26g0172 857 Gene3D Leishmanolysin domain 3 439 497 - -
Lele26g0172 857 FunFam leishmanolysin-like peptidase isoform X2 438 497 - -
Lele26g0172 857 FunFam Teneurin transmembrane protein 2 604 634 - -
Lele26g0172 857 Gene3D Leishmanolysin , domain 2 310 435 - -
Lele26g0172 857 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 54 816 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele26g0172 857 Gene3D - 110 300 - -
Lele26g0172 857 Pfam EGF-like domain 636 663 IPR013111 -
Lele26g0172 857 SMART egf_5 635 664 IPR000742 -
Lele26g0172 857 SMART egf_5 604 632 IPR000742 -
Lele26g0172 857 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 112 600 - -
Lele26g0172 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 398 427 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Lele26g0172 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 245 274 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0172 Lele-ChrLele26 1011024 1017647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0172 26 1011024 1017647 Lele27g1920 27 23729284 23735931 hybridization
Lele26g0172 26 1011024 1017647 Lele28g0174 28 1021222 1027832 hybridization