Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0167 ATGAAACACGCATTCATGCGCTCTAGTCACTCGTGTTTATCTTTGTCCTCCGAGCTTGTCTCTTCTCTTCTCTCCTTGTTTCAGGCTTTAGCATTCTCTTTGTCTTGCTGTTGCATTGCTGCTGCTCTTGGACTCTCCGATGGCCATACTCTTCCATTCTGTACTTGTGAGTTCCGCATTTCTTCTCATGCTCTCTGTCTCTTTGTGTCCTCACAGCTTTGCGCTCTGACTGTTCGTTTCTTTTATCGGCTAACAAACAAAGAAAACACTTCTGTGGTTGGAGTTGAGTTCTGTGATCACTGCGTTTTTTCTATTCTGTTCGATCTATGTCCTTTGCTGTTTTTTCCTTTAGGAAAGATGAAATTGAGATCTAAGAAAGGATGGAAGACTTTGGTACCTCTTCATTTGAAGGGTAAATCAGCACTCCGTTTTTCTCTGTTCCCCAAAGTCAATTCAAATAGCTATGGTCCTGGCGAAACTCCAGTTTATCTGAATGTATATGACTTGACGCCCATGAATGGTTATATGTACTGGACTGGCCTAGGTATCTATCACTCTGGTGTCGAAGTATATGGTGTAGAATATGCATTTGGAGCTCATGACTATCCAACTAGCGGTGTCTTTGAGGTGGAACCTCGGCTATGCCCTGGATTCAAGTTCAGGAAGTCAATATTCATAGGAACCACCAGTCTGGATCCTGTACAGGTCAGGGATTTCATGGAACGCCAGTCAACAAACTACAATGGTGATACATATCACTTAATTGTGAAGAATTGCAACCATTTCTGCAAGGACATCTGTTACAAGCTGACAGGGAAGTCAATTCCAACATGGGTTAATCGACTGGCCAGACTAGGTTCAGTTTGCAACTGCATTCTTCCAGAAGCACTCAGAATTTCTGCTGGGAGGCATGATCCTAATTTCCAGACTCGCGAGAGTGAAAAAAGAAGGCTGCGAAGCGCCGTCAATTGTCTGTCCTCAATCTCAATGCGGCAAAAGCACTTATCAACGTCTTCACTGTTTCTACAGTCACCCCTGAGAGGCTGTTTATCGTCATGGGAGTTTAGGAAGTCCATTAAAGAAAGATTGTGGTGTAAAGTCACTGTTATGGCTCCATATGCTGTAAATCCAATTGAGAATTATCGTTTTTGTTGGGGGTTTTTTTTTGGAGGTGGGGGAGAAGAAGCTAAATTTATAAAGCGTCACCTCCGTCAGCTGCATTTCTTTGTTGTAATATGCCGCATCTAA 1248 0.4303 MKHAFMRSSHSCLSLSSELVSSLLSLFQALAFSLSCCCIAAALGLSDGHTLPFCTCEFRISSHALCLFVSSQLCALTVRFFYRLTNKENTSVVGVEFCDHCVFSILFDLCPLLFFPLGKMKLRSKKGWKTLVPLHLKGKSALRFSLFPKVNSNSYGPGETPVYLNVYDLTPMNGYMYWTGLGIYHSGVEVYGVEYAFGAHDYPTSGVFEVEPRLCPGFKFRKSIFIGTTSLDPVQVRDFMERQSTNYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSVCNCILPEALRISAGRHDPNFQTRESEKRRLRSAVNCLSSISMRQKHLSTSSLFLQSPLRGCLSSWEFRKSIKERLWCKVTVMAPYAVNPIENYRFCWGFFFGGGGEEAKFIKRHLRQLHFFVVICRI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0167 415 SMART DUF862_2a 160 298 IPR008580 GO:0008233
Lele26g0167 415 Pfam PPPDE putative peptidase domain 161 296 IPR008580 GO:0008233
Lele26g0167 415 ProSiteProfiles PPPDE domain profile. 160 297 IPR008580 GO:0008233
Lele26g0167 415 Gene3D PPPDE domains 156 305 IPR042266 -
Lele26g0167 415 PANTHER DESUMOYLATING ISOPEPTIDASE 158 339 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0167 Lele-ChrLele26 965063 969005 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0167 26 965063 969005 Lele27g1926 27 23770384 23773417 hybridization
Lele26g0167 26 965063 969005 Lele28g0170 28 980290 986595 hybridization