Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0156 ATGGCTATAGCTCGTATAGTTCGCCAAGGCAAACGCCCATATGGGTTATGGGTAAAAATGACGGCTGTGACTGTATTGGGCATTTGTTTTATCTTTGTGTGGTCAGTTTTTACTTCCCCCTCCTCCTCCGTAACTACCCAGAGGGAAAGCTTTGACGACATTGCTGAGCCCGTATCTGCTAACAAGATGGACAATAATTCTGGGGTTAAAACAAAGAAGATACAACCAGAAAAGGAGGAGGAATCAAGTAAGGTAGGCAATTTGTTGAGAGATGAATTTCGGAGAGACGAGAAGAACGGGAAAAAGATGAATGGATCAGCTGCGGTGTCTGTTAAGCACCGTGAACACAAGGAAAGAAACAGGAGGCCGGGGACGCATGACCAGAAGAAGGAACATAAGGAAATTAAAGAGAACCAGATTCAAGAGTCTGGGAATTATGATGGTAAAGAATCAGAGGAGGACAAGGAAGAAGAGGTGGATGGTCAAGAAATAGAAGTTGAAGAACAAGGATTAGATCGGGAAAGTGAAACGGATGTGGATACAGATGGGGGCACCGAGTTAGTTGAGTCGGGTGATCAGGATTCTGAGGCGATGGAGGATGGAAGTATGGAGTCCAAAAAACCAACCAAGAGGAAGATAAAAGGACCGTTGTTTGATCCAAAAGCCACCTATAAATGGAAATCATGTAGCACCAGAAGCAAACATAACTACATTCCATGTATAGATATTGAAGCTAGTTCTGGAAAACTACAGAGCTATCGCCATACAGAGAGGAGTTGCCCAAGAACGCCACCAATGTGTTTGGTTCCTCTTCCTCATGAAGGATATGGTTCTCCCGTCCCATGGCCTGAGAGCAAGTCTAAGATATTTTACAAGAATGTGGCACACCCAAAGTTAGCGGCATACATAAAAAAACATAATTGGCTGGTGGAGTCTGGAGGATATCTTACATTTCCACAGAACCAGTCTGAACTTCAGGGCGGGATTCTCCATTATCTTGAGTCCATTGAAGAGATGGTACCAGACATTGAGTGGGGAAAAAATGTTCGTGTTGTACTGGACATTGGATGTACAGATCTGAGTTTTGGAGCTGCTCTCCTTGATAAGGAGGTTTTGACGTTAACGCTAGGCTTAAAGGACGATCTGGTGGATCTAGCTCAGGTGGCTCTAGAGCGTGGTTTTCCTTCAGTGGTGAGCCCTTTCGGTAGAAGGAGGCTTCCTTTTCCCAGTAATGTCTTTGATGCTATACATTGTGGGGGTTGCGGCATATCTTGGCATTCCAATGGGGGTAGGCTTCTTTTAGAGATGAATCGGATACTAAGGCCAGGTGGATACTTTCTTCTGTCTGCTAAGCACAACAGTATTGAAGAGGAAGAAGGGTTGACAAAATTGATGGCATCTATTTGTTGGAATGTTCTGGCTCACAAAAGTGATGATGTGGGTGAAGTTGGTGTTAGAATATATCAGAAGCCTCAAGCAAATGACATATACGAATTGAGGAGGAAAAAGATCCCCCCACTTTGCAAAGAAAGTGAAAATCCTGATGCAGCTTGGTATATTCGGATGAAGTCTTGTCTGCACTCAGTTCCGTCTGGGATTGAACAGCACGGAGCAGAGTGGCCCGAGGAATGGCCCAAGAGGCTTGAATCTTATCCTGACTGGATGAGCAATAAAGAGAAATTGGTCGCAGACACCAACCACTGGAAAGCCGTGGTTAACAAGTCATATCTCAAAGGAATGGGCATTGACTGGTCCAGTATCAGGAATGTAATGGACATCAAAGCCGTCTATGGAGGATTGGCCGCAGCTCTCTCTGAACAGAAGGTGTGGGTAATGAATGTAGTCCCTGTTCAAGCACCAGATACACTTCCTATCATCTTTGAACGGGGCTTTGTGGGCGTCTATCATGATTGGTGCGAGTCATTTGGCACTTATCCAAGAACATATGATCTCTTGCATGCTGATCACTTGTTCTCACGCCTCAAGAACAGGTGTAAGCAGCCAGTATCCATTATTGTTGAGATGGACCGTATATTACGGCCTGGAGGTTGGATGATCATGCGTGACAAAGTTGACATTCTAAATCCAGTAGAGGATATATTAAGAAGCCTTCAGTGGAAGATCGTTATGACTTTCGCTCAAGATAAGGAAGAACGAGTAGAACAAGAGAAGCAAATCATGCCGTTGTCATCAGTTCCTGCTCGTCTTACGCTTCTTGCACTTTTCTCTGCCACCACCTTCTATTGTCTGTACAAATGTCGCCGCCTCACACACTTGAAACTTCCCCTACATCATAAACGCACTATTCCCAATACCAGAGGGAAGATTCTCTTCGTTTCTCAAACAGGTACTTCTAAATCCCTTGCTTGGCGTCTTCACCAGCTGTTGGCGGCCAACGACCTCGCTTTCGTCATCGTCGACCCCAATGACTACGAACCTGAAGACCTTCCTAAAGAGACTCTGGTCCTCATCGTAGCTTCAACCTGGGAAGATGGAAAACCACCTCCAAGTGCCAAATTCTTTGCAACTTGGCTCGCTGAAAGTGCCAAGGATTTTAGGGTGGGCTCTTTGTTGCTTTCACGGTGCAAATTTTCTATATTCGGCGTTGGAAGTCGAGCTTATGGAGCCACCTTTAACGCTGTTGCAAGGGATTTGGCAGAGCAGATGAGGGCGTTGGGGGCGACGGAGATGCTTCCCGTGTGTGAAGGAGATGTCGACACAGGTGATATAGATGGGGTTTTCGATCTTTGGTGTGCAAAGGTGGTTAGCTTTTTGAAGGGTGCTGTTTTAGAAAATGGCGGGGTTTTTGAGTCCAAGGTCGGTGGGCATTACGAAGAGGATTCGGATGAAGAGAACGGTATGGAGTCGGAGATTGTTGATCTTGAGGACATTGCGGGTAAAGCTCCTACGAGGAAGTCGGCATCAGTAGGTGAAACTAATGGGAAATTGGACGGCAAAAGAGAAATGGTTACTCCAGTGATTAGAGCGAACTTAGAAAAGCAGGTATGCTTGTGCATGGAGGCAACCCCTAGTTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAGAAGTCGGCAGTGGAAGATGGATGATCCAATAGAAATTGTAAATTCTGCAATAGACCTACATAAAAATATGATTAAGGAAATGAAAGGAGTCCCTGGGGTCACCTTGGAGCGATTATCTGAAGGTCTCTCTCCTCGCCATTGTGCATTATCGCTTGTTGGAGAACCCATCATGTATCCAGAGATCAACACGCTTGTAGATGAGCTGCATAAACGGCGGATTTCTACATTTCTAGTGACAAATGCACAGTTTCCAGAGAAGATTAAGTTACTGAAGCCTGTCACCCAGTTATATGTCAGTGTAGATGCTGCTACAAAGGATGCTTTGAAGGCAATAGATAGGCCACTTTTTGGAGATTTCTGGGAACGATTCATTGATTCCTTGACTGCTTTAAAGGAGAAAGAGCAGAGAACTGTTTATCGTTTGACCCTGGTTAAAGGTTGGAACACAGCTGAAGTGGATGTTTATTCAAAGCTCTTTAGTATAGGAAAACCTGACTTTGTAGAAATCAAGGGAGTCACATATTGCGGCTCGTCTGCAACATCAAAATTGACTATGGAAAATGTCCCCTGGCATACTGATGTCAAAGCTTTCTCAGAGGCATTGGCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCCTGTGAGCATGCTCACTCATGTTGTGTCCTCTTGGCGAAAACTGAGAAATTCAAGATTGATGGCTTATGGTACACGTGGATAGACTATGAGAAATTTCATGACCTGGTGGCTTCTGGGAGAAGTTTTAACAGCAGAGATTACATGGCTGCCACGCCATCCTGGGCCGTCTATGGAGCAGAGGAAGGTGGATTTGATCCTGGACAATTGAGATATAGGAAAGAGCGACATCATAAATCAAGCCGGTGA 3975 0.4508 MAIARIVRQGKRPYGLWVKMTAVTVLGICFIFVWSVFTSPSSSVTTQRESFDDIAEPVSANKMDNNSGVKTKKIQPEKEEESSKVGNLLRDEFRRDEKNGKKMNGSAAVSVKHREHKERNRRPGTHDQKKEHKEIKENQIQESGNYDGKESEEDKEEEVDGQEIEVEEQGLDRESETDVDTDGGTELVESGDQDSEAMEDGSMESKKPTKRKIKGPLFDPKATYKWKSCSTRSKHNYIPCIDIEASSGKLQSYRHTERSCPRTPPMCLVPLPHEGYGSPVPWPESKSKIFYKNVAHPKLAAYIKKHNWLVESGGYLTFPQNQSELQGGILHYLESIEEMVPDIEWGKNVRVVLDIGCTDLSFGAALLDKEVLTLTLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPSNVFDAIHCGGCGISWHSNGGRLLLEMNRILRPGGYFLLSAKHNSIEEEEGLTKLMASICWNVLAHKSDDVGEVGVRIYQKPQANDIYELRRKKIPPLCKESENPDAAWYIRMKSCLHSVPSGIEQHGAEWPEEWPKRLESYPDWMSNKEKLVADTNHWKAVVNKSYLKGMGIDWSSIRNVMDIKAVYGGLAAALSEQKVWVMNVVPVQAPDTLPIIFERGFVGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIIVEMDRILRPGGWMIMRDKVDILNPVEDILRSLQWKIVMTFAQDKEERVEQEKQIMPLSSVPARLTLLALFSATTFYCLYKCRRLTHLKLPLHHKRTIPNTRGKILFVSQTGTSKSLAWRLHQLLAANDLAFVIVDPNDYEPEDLPKETLVLIVASTWEDGKPPPSAKFFATWLAESAKDFRVGSLLLSRCKFSIFGVGSRAYGATFNAVARDLAEQMRALGATEMLPVCEGDVDTGDIDGVFDLWCAKVVSFLKGAVLENGGVFESKVGGHYEEDSDEENGMESEIVDLEDIAGKAPTRKSASVGETNGKLDGKREMVTPVIRANLEKQVCLCMEATPSLACANKCVFCWRHHTNPVGRSRQWKMDDPIEIVNSAIDLHKNMIKEMKGVPGVTLERLSEGLSPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPEKIKLLKPVTQLYVSVDAATKDALKAIDRPLFGDFWERFIDSLTALKEKEQRTVYRLTLVKGWNTAEVDVYSKLFSIGKPDFVEIKGVTYCGSSATSKLTMENVPWHTDVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTEKFKIDGLWYTWIDYEKFHDLVASGRSFNSRDYMAATPSWAVYGAEEGGFDPGQLRYRKERHHKSSR 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0156 1324 SUPERFAMILY Flavoproteins 773 925 IPR029039 -
Lele26g0156 1324 Gene3D - 750 932 IPR029039 -
Lele26g0156 1324 PRINTS Flavodoxin signature 861 871 IPR001094 GO:0010181
Lele26g0156 1324 PRINTS Flavodoxin signature 775 788 IPR001094 GO:0010181
Lele26g0156 1324 PRINTS Flavodoxin signature 823 834 IPR001094 GO:0010181
Lele26g0156 1324 PRINTS Flavodoxin signature 886 905 IPR001094 GO:0010181
Lele26g0156 1324 Pfam Radical SAM superfamily 1010 1186 IPR007197 GO:0003824|GO:0051536
Lele26g0156 1324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 522 690 IPR029063 -
Lele26g0156 1324 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 236 719 IPR004159 GO:0008168
Lele26g0156 1324 MobiDBLite consensus disorder prediction 55 216 - -
Lele26g0156 1324 Pfam Wyosine base formation 1193 1256 IPR013917 -
Lele26g0156 1324 MobiDBLite consensus disorder prediction 151 198 - -
Lele26g0156 1324 MobiDBLite consensus disorder prediction 71 140 - -
Lele26g0156 1324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 472 IPR029063 -
Lele26g0156 1324 Pfam Flavodoxin 776 914 IPR008254 GO:0010181
Lele26g0156 1324 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 1005 1322 IPR034556 GO:0008033|GO:0051539
Lele26g0156 1324 Gene3D Vaccinia Virus protein VP39 330 498 IPR029063 -
Lele26g0156 1324 Gene3D Aldolase class I 1001 1267 IPR013785 -
Lele26g0156 1324 SUPERFAMILY Radical SAM enzymes 1011 1184 - -
Lele26g0156 1324 CDD AdoMet_MTases 352 449 - -
Lele26g0156 1324 ProSiteProfiles Flavodoxin-like domain profile. 774 922 IPR008254 GO:0010181
Lele26g0156 1324 CDD Radical_SAM 1010 1186 - -
Lele26g0156 1324 ProSiteProfiles Radical SAM core domain profile. 998 1241 IPR007197 GO:0003824|GO:0051536
Lele26g0156 1324 MobiDBLite consensus disorder prediction 199 216 - -
Lele26g0156 1324 SFLD Radical SAM 1010 1184 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0156 Lele-ChrLele26 880267 891139 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0156 26 880267 891139 Lele27g1943 27 23847877 23852019 hybridization
Lele26g0156 26 880267 891139 Lele28g0156 28 884574 889321 hybridization