Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0120 ATGATGTACCCGAACCAAGCTTTTTCTTCTGGGTCCTACGTGGAGATGTTTTCTGGGAATTCTCTTTTATCTCATAACTTCACAGAAACTGTAGGAAGCCAAAATGAGGTGAAGTTCATCACAGGCGTAGGTGACACGGTGGGAATGCAATCTATTGATGGTCATTCCAACACTGCAACAGGTGATCCATCTGTCAACTCCTTCACAAGGACGCAATTGGGGCTCGTTGACAATGAACAACACAACATACAGAGCCAGGGCTTATCTCTTAGCCTTGGCACACTCATGCCTGTCCCTCCCTTCCAATACCACTATCCCTCCGCCGGCTTTTCGTCTCTTATGTCTCCAAGTCTTCCTAACTTTAAGGGCACTGTTTCTCTTAAAGATGGCGAGCCAAGTTCTGAATGCATGGCGCCTGTTTCTTCTGGAGGTTTTAACAGCTCCATCCAAAAGGAGGCTCTGTACAATCCACACTCCTCACTCTACCACAAGGAAGTTCCCAATGATCCGTCATGTCTGCACGGGACACAAGGCTTTTCAAACGCTGCCTTAAACTCTCAATACCTTAAAGCAGCTCAGGAATTGCTTGATGAAATAGTTAATGTACGAAAAGCTTTGAAGCAACCTGGACTGGAAAAGCAAAAAGGTTCCCGTGACATTGGATTAGATGGCTCCAAAGAGTCCGAGGAAAAGTCTACCAGTCAATCTATGCAGAACCAGGACCCTAATGCTTCATCTGCCAATGCGTCGTGTGAATTGTCATCCGCAGAACGGCAGAATTTGTTGGATAAGAAGGCAAAGCTTTTATCCATGTTAGACGAGGTAGATAAAAGATACCGGCAGTACTGCCATCAGATGCAAATGGTGGTATCATCTTTTGATATGGTTGCTGGTTGTGGGGCTTCTGAACCATACACTGCACTTGCTTTGCGAACAATTTCTCGCCATTTTCGCTGTTTGCGTGATGCTATTAGTGGCCAAATTCAAGTGACTCAGAGGAGCCTTGGAGAACAAGAGGGGATACCTCGTCTCCGCTATGTTGATCAGCAGCTAAGGCAACAAAAGGCCCTTCAGCAGCTTGGCGTTATGCGTCAAGCTTGGAGGCCCCAGAGGGGACTTCCTGAAAGTTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCTTACCCAAAGGATTCGGAGAAAATTATGCTGGCAAGGCAAACAGGCCTGACCAGGAACCAGGTGGCAAACTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCCGAGATGGCAAGCTGCAATCTCTCGTCTGAAAGTACTCCCCAAGCTCCAAGAGATAATAAAGGGGAAGAGTCGCAGGACAATGTGAAAGCTGCTAATAATGTCCAACATGGGCAGCTTCATGGGTCGAAGCTAGACCATAGTTCCGCCAGAGGATTTGATACTGCCCATGGAGAAGCTGTCATGCATTCTGGAATCATGAAATTGCAGGGTGATCAACGGCCTAATATGAACAATACCCTTTATTCGAGCGGACCTATGCCAACCAGCCACAACGGTGATGGCTGCCTAATGCCTTCTGATCCGGAAGCCTCATACGATTTATCAGAGTTGGGTGGTTTTCCGGTGGGTGGCCATGTGTCTCTTGCGTTGGAGTTGCGCAACTGTGAAACTGGGGAATTCGCCACGTCTGATAATGGTTTCAACAAACAACGCAACCAGACGTTAGATTCTTCCCTAGAAAATAATTTGATTGATTATCATTTCACAGATTCAGGAAAGCAACCAAACAGGTTCAGTAATCCTCATCTATTGCATGAGTTTGTCGTCTAA 1869 0.4639 MMYPNQAFSSGSYVEMFSGNSLLSHNFTETVGSQNEVKFITGVGDTVGMQSIDGHSNTATGDPSVNSFTRTQLGLVDNEQHNIQSQGLSLSLGTLMPVPPFQYHYPSAGFSSLMSPSLPNFKGTVSLKDGEPSSECMAPVSSGGFNSSIQKEALYNPHSSLYHKEVPNDPSCLHGTQGFSNAALNSQYLKAAQELLDEIVNVRKALKQPGLEKQKGSRDIGLDGSKESEEKSTSQSMQNQDPNASSANASCELSSAERQNLLDKKAKLLSMLDEVDKRYRQYCHQMQMVVSSFDMVAGCGASEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMASCNLSSESTPQAPRDNKGEESQDNVKAANNVQHGQLHGSKLDHSSARGFDTAHGEAVMHSGIMKLQGDQRPNMNNTLYSSGPMPTSHNGDGCLMPSDPEASYDLSELGGFPVGGHVSLALELRNCETGEFATSDNGFNKQRNQTLDSSLENNLIDYHFTDSGKQPNRFSNPHLLHEFVV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0120 622 SMART prehox3 177 326 IPR006563 -
Lele26g0120 622 Gene3D - 364 441 - -
Lele26g0120 622 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 128 455 - -
Lele26g0120 622 SMART HOX_1 367 431 IPR001356 GO:0003677
Lele26g0120 622 ProSiteProfiles 'Homeobox' domain profile. 364 427 IPR001356 GO:0003677
Lele26g0120 622 MobiDBLite consensus disorder prediction 210 230 - -
Lele26g0120 622 SUPERFAMILY Homeodomain-like 368 435 IPR009057 -
Lele26g0120 622 MobiDBLite consensus disorder prediction 210 252 - -
Lele26g0120 622 Coils Coil 258 278 - -
Lele26g0120 622 Pfam Associated with HOX 184 325 IPR006563 -
Lele26g0120 622 MobiDBLite consensus disorder prediction 231 252 - -
Lele26g0120 622 CDD homeodomain 367 428 IPR001356 GO:0003677
Lele26g0120 622 MobiDBLite consensus disorder prediction 443 468 - -
Lele26g0120 622 Pfam Homeobox KN domain 384 423 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0120 Lele-ChrLele26 712483 714784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0120 27 439 Homeobox Transcription Factor Family AT1G19700 48.874 5.37e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele26g0120 POX 4e-50 No_clan