Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0113 ATGGCTGCTCTAATTTCTCCACCATTTTCATCCTCATTTTCTATCGTTCGCTTCCCTGAAACTTCCGTGTTTTCCACTCGCCTGCTTCCTCCAAGGTATCTTCAACAGAGATGCAGTCCTGATAATTATGGATGGTGCGCGGTTAAGTGCAGACTTCTCAGCGTCAGTGTGGCTCCTTCCTCAAATCCTCCGACAGTGATCAAGGAACCCCACAAGTATTTTGATCAGGCAATCATCACAGTTCGTTCGGGTGATGGAGGCCATGGAGTTATACTTAGCATGCCCAGTCAGAGAATTAATAGCTCACAAGGAAGACGTGAAAAGGAAAAGACAAGGAAAAAAAACTCCTATAGAAGAGACTTTGATGGATCGCTTATCCTACCTGTGGGTGGGCATGGAGGGGATGTGGTGATTTATGCGGATGAGGAAAAAGATTCATTATTGGAATTCCACAGCAAAAGTCGCTATAATGCAAAGCGTGGTGGCAATGTTGATGCCATGGGTATTTTGACCTCACAATTGCATGATGGACTTGCCGCTCCAACTCTGCGCATTCCTGTGCCTGTAGGTACTGTTGTAAAACGCAAGAGAGGGAAATTGCTGGCTGATCTGGCACAACCAGGTGATGAAGTTCTTGCTGCGAGGGGGGGACAAGGAGGGATTAGCTTGTTAGATCTGCCACAGCATAAAAGGAAAAGAATGATGGCATTGACAACAAATGTGTTGAGAGATGACAATGATAAGGTTTTAGTTCATGGTCAACCAGGAGAGGAAGTTAGCTTGGAGTTGATCCTACGAGTTGTCGCTGATGTTGGTCTAGTTGGACTTCCGAATGCTGGGAAATCAACACTACTGGCAGCGATTACACTAGCAAAACCTGATATTGCCGATTATCCTTTTACAACATTAATGCCGAACCTTGGACGCCTAGGTGGTGACCCCAGCTTGGGAGCAGGGATGTTTTCATCTGAAGCTACATTAGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGAAATTTCTTGAGGCACCTCAGGAGGACCCGGCTTCTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCGTCAATGATTATAGAACTGTCAGGGAAGAGTTGCGCATGTATAACCCTGAATACCTTGACCGACCTTACATTGTGATTTTAAATAAGATTGACCTTCCAGAGGCAAAGGACCGGCTTCCAGCATTGACTGAAGAAATACTGAGAATTGGGAGCGTTGGTACACCTTCTGAACCAAAACTAACATCTGAAGCTCCGGATCAGTCATTATCCAATGAAGTTGTCATCAAGGAAAAGAAACTGGAGGATTATCCCCCACCCCTGTCCGTTGTGGGTGTTAGTGTTCTGAAGGGCATCATGATAGATGACATGTTAAAGGAGATAAGGAAAGCTTTAAGGAAGTGTATGGATCCCACTGAAGTATCATCGGCTTTGAATTCGCCCTCAGAAACTGGCAAGTGA 1503 0.4564 MAALISPPFSSSFSIVRFPETSVFSTRLLPPRYLQQRCSPDNYGWCAVKCRLLSVSVAPSSNPPTVIKEPHKYFDQAIITVRSGDGGHGVILSMPSQRINSSQGRREKEKTRKKNSYRRDFDGSLILPVGGHGGDVVIYADEEKDSLLEFHSKSRYNAKRGGNVDAMGILTSQLHDGLAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEVLAARGGQGGISLLDLPQHKRKRMMALTTNVLRDDNDKVLVHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPVNDYRTVREELRMYNPEYLDRPYIVILNKIDLPEAKDRLPALTEEILRIGSVGTPSEPKLTSEAPDQSLSNEVVIKEKKLEDYPPPLSVVGVSVLKGIMIDDMLKEIRKALRKCMDPTEVSSALNSPSETGK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0113 500 CDD Obg 269 414 IPR031167 GO:0005525
Lele26g0113 500 MobiDBLite consensus disorder prediction 95 115 - -
Lele26g0113 500 Gene3D - 268 487 IPR027417 -
Lele26g0113 500 PRINTS GTP1/OBG GTP-binding protein family signature 292 310 IPR006073 GO:0005525
Lele26g0113 500 PRINTS GTP1/OBG GTP-binding protein family signature 327 342 IPR006073 GO:0005525
Lele26g0113 500 PRINTS GTP1/OBG GTP-binding protein family signature 271 291 IPR006073 GO:0005525
Lele26g0113 500 PRINTS GTP1/OBG GTP-binding protein family signature 344 362 IPR006073 GO:0005525
Lele26g0113 500 Pfam 50S ribosome-binding GTPase 270 397 IPR006073 GO:0005525
Lele26g0113 500 Pfam GTP1/OBG 130 266 IPR006169 -
Lele26g0113 500 ProSitePatterns GTP1/OBG family signature. 329 342 IPR006074 GO:0005525
Lele26g0113 500 Gene3D GTP1/OBG domain 72 267 IPR036726 -
Lele26g0113 500 ProSiteProfiles Obg domain profile. 71 268 IPR006169 -
Lele26g0113 500 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 269 480 IPR031167 GO:0005525
Lele26g0113 500 SUPERFAMILY Obg GTP-binding protein N-terminal domain 73 235 IPR036726 -
Lele26g0113 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 487 IPR027417 -
Lele26g0113 500 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 68 477 IPR045086 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0113 Lele-ChrLele26 675337 679266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0113 26 675337 679266 Lele27g1979 27 24045042 24047543 hybridization
Lele26g0113 26 675337 679266 Lele28g0113 28 682727 686705 hybridization