Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0110 ATGGCGGACGGAGGTTGTTGGCCGACGATGGATCTGCTTCGTTCGGAGCCAATGCAACTTGTGCAACTTATCATTCCAACTGAATCAGCTCACCGAGCCATCTTTTACCTTGGAGATCTTGGTCTCTTCCAGTTCAAAGATCTAAATGCAGAGAAAAGCCCATTTCAACGGACATATACTGCTCAGATTAAAAGGTGTGAGGAAATGGCACGTAAGCTTCGGTTCTTTAGGGAACAAATGACAAAGGCTAGTGTATCACCCTCAAGAAGGTCCACAGAAGAAGCTGAAGTCGATTTGGATAATTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTGGAGATTAATGTGAATAATGAGGAGTTGCAACACACCTACCGTGAGCTATTAGAGTATGAACTTGTTCTAAAGAAGGCTGGTGAATTTTTCGCTTCAGCTAGAAATAGTGCCACAGCTCACCAAAGAGAGCTTGAAGTCCAGAACACTTTTGAAGCATCTATTGACAACCCGTTATTATTGGAAAAAGAGTCGCCACCAGATCTACCCAAGCAGCTTAACCTGGGGTTCATTAGTGGTCTTGTTCCTAGAGAAAAATCAATGGCATTTGAAAGAATATTATTTCGTGCTACAAGGGGTAATGTGTTTCTAAAGCAAGTTGCGGTTGAGAATCCTGTTCTTGATCCTTTATCAGCAGAGAAGATTTATAAAAACGTGTTTGTAATATTTTATTCTGGAGAGAGAGCAAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCATTCACTGATGATCTGGGTAAACAATTTCAGATGACAACAGAGGTGTCAGGAAGACTTTCTGAATTGAAGACTACCATTGAGGTTGGATTGTTGCACCGTAGCACTCTTTTGCACACAATTGGTTGTTACTTTGAGCAGTGGAGCCTTCTGGTGAAGAAGCAAAAATCCATTTTCCACACTCTAAATATGCTTAGCATAGATGTAACAAAGAAATGTCTTGTAGCTGAATGTTGGTGTCCTGTTTTTGCAACCAACAAGATTCAAGTTGCATTGCACCGGGCAACCGTGGACAGTAACTCACAAGTTGGGGTGATATTTCAAGTCTTACAAACAAAGGAATCACCACCAACATATTTCCAGACGAATAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAGTTGCAAAGTATCGGGAGGCAAACCCTGGCGTATATACAATTATCACCTTTCCCTTCCTCTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGCCTATTACTAGCAACTTCATATTTCATAATTAGAGAGAAGAAATTTTCTACTCAGAAACTTGGAGACATAATAGAAATGACTTTTGGCGGTCGCTATCTTATTATGATGATGGCACTATTCTCAATATACACTGGACTGATATATAATGAGTTTTTCTCTGTCCCATTTGAACTATTCGGGCGATCTGCCTATGGATGCAGTGATTTTTCATGCAGGGATGCAACCACAACAGGCTTAATAAAGGTTCGTGGCACTTATCCATTTGGAGTGGATCCTAAGTGGCACGGAACACGGAGTGAGCTGCCATTTCTTAACTCGTTGAAGATGAAGATGTCAATCCTATTGGGAGTCGCCCAGATGAATCTTGGAATTATATTAAGCTACTACAATGCCAAGTACTATAGGAATGACATAAATATCTGGTACCAGTTTGTTCCCAAAATGTTATTCTTAAACAGCTTGTTTGGCTACCTTTCGCTCCTCATAATTGTTAAATGGTGCACTGGATCACAAGCTGACTTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATCTGGGTGAAAACCAGCTCTTTATTGGCCAAAAGTTCCTTCAACTTGTGTTACTATTGTTGGCACTTGTTGCTGTACCATGGATGTTGTTTCCAAAGCCTTATCTCCTCAAGAAGCAGCACCGAGAAAGGCATCAAGGTCAATCTTACTATCTGCTTTACAGCAGCGATGACCCTCTTGAATCAGAGCCACATATTAATCCCCATGGAGATGATGAGTTTGAGTTCAGTGAGGTTTTCGTACACCAACTTATTCATACAATAGAATTTGTGCTTGGGGCAGTGTCTAATACAGCTTCATACCTACGATTATGGGCCCTCAGTCTGGCACATTCAGAGTTGTCAAGTGTGTTCTATGACAAAGTTCTTCTTCTGGCCTGGGGGTTCAACAACGTCATTGTTCTCATTGTTGGCATTATTGTTTTCGTATGTGCTACCGTTGGCGTGCTACTGGTTATGGAAACTCTGAGTGCTTTCTTGCATGCATTGAGGCTTCACTGGGTGGAGTTCCAGAATAAGTTTTATGAGGGAGATGGTTACAAGTTCAGCCCATTTTCATTTGCCTTGCTTAATGAAGAGGATGAAATATGTTTAGGTTCGCAAAGTGCTTCTGAAAATGGGTTCCCTTCTTCTACTGGTCATGTAATCTTCTGACAGGGCGGAAAGAATGAGTTCTCCCCAAGTTCAGTTCCAGTTTTTTCTTTCATTGATGTGCAACAATCTAGAGATTTGTCCGTCTTGCTGCAATTGCTGCCTCTTGAAATGCACCAGCCGCAAAGGAATTGTGATAGCAAAATACTTATCTTATCACCCTACAGTGAGGGAAGAGAGAAACCTGAGAGAGGCAGAATCCAGAGAGCTCAGAGTCGTGGGAGCGACATGGATGAAGATCACAATTACAGTGGCAGTGGCGGCAATCACGTGGAGACTTCCAAGGCTGAGAGATCCGTTTGGCTGATGAAGTGTCCTGTCGGCGTCGCTAAGTCATGGCAGAATCATCCTCCCTCTCATCCTCAACAGCTCGCCAAGGTCGTCCTCTCCCTCGATCCTCTTCATGCCGACGATCCCTCCGCTCTCCAGTTCACGATGGAGATGGCTGGCACAGATGCAGTGAATAAGCCGAAAACCTATTCTTTAAATATGTTTAAGGATTTTGTTCCTATGTGCGTATTCTCTGAGACAAACCAAGGCAAGGTTGCGATGGAAGGGAAAGTGGAACATAAATTTGATATGAAGCCCCATGGTGAAAATATTGAAGAGTATGGCAGATTGTGTCGTGAGAGGACAAACAAATCTATGATTAAAAATCGACAAATACAGGTTATTGATAATGATCGTGGAGTTCTAATGAGGCCCATGCCTGGAATGGTTGGTCTAGTTTCTTCCAATTCAAAGGATAAGAAGAAGACACAACCAGTGAAACAGTCAGATACAAAGAGAACAAGAAGAGATCGTGGAGAGCTGGAGGACATAATGTTCAAGCTATTTGAAAGACAGCCTAATTGGGCCTTGAAGCAGCTTGTCCAAGAGACTGACCAACCAGCTCAATTCTTGAAGGAGATACTGAATGAATTGTGCGTGTACAATAAAAGGGGTGCCAATCAAGGAACTTATGAGCTTAAGCCCGAATACAAGAAATCTGTTGTCGAAGAAGATACAGGTGCCGAATAA 3537 0.4196 MADGGCWPTMDLLRSEPMQLVQLIIPTESAHRAIFYLGDLGLFQFKDLNAEKSPFQRTYTAQIKRCEEMARKLRFFREQMTKASVSPSRRSTEEAEVDLDNLEVKLAELEAELLEINVNNEELQHTYRELLEYELVLKKAGEFFASARNSATAHQRELEVQNTFEASIDNPLLLEKESPPDLPKQLNLGFISGLVPREKSMAFERILFRATRGNVFLKQVAVENPVLDPLSAEKIYKNVFVIFYSGERAKSKILKICDAFGANRYPFTDDLGKQFQMTTEVSGRLSELKTTIEVGLLHRSTLLHTIGCYFEQWSLLVKKQKSIFHTLNMLSIDVTKKCLVAECWCPVFATNKIQVALHRATVDSNSQVGVIFQVLQTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLATSYFIIREKKFSTQKLGDIIEMTFGGRYLIMMMALFSIYTGLIYNEFFSVPFELFGRSAYGCSDFSCRDATTTGLIKVRGTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYYNAKYYRNDINIWYQFVPKMLFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFIGQKFLQLVLLLLALVAVPWMLFPKPYLLKKQHRERHQGQSYYLLYSSDDPLESEPHINPHGDDEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNVIVLIVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFALLNEEDEICLGSQSASENGFPSSTGHVIFXQGGKNEFSPSSVPVFSFIDVQQSRDLSVLLQLLPLEMHQPQRNCDSKILILSPYSEGREKPERGRIQRAQSRGSDMDEDHNYSGSGGNHVETSKAERSVWLMKCPVGVAKSWQNHPPSHPQQLAKVVLSLDPLHADDPSALQFTMEMAGTDAVNKPKTYSLNMFKDFVPMCVFSETNQGKVAMEGKVEHKFDMKPHGENIEEYGRLCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMVGLVSSNSKDKKKTQPVKQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVVEEDTGAE 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0110 1178 MobiDBLite consensus disorder prediction 899 924 - -
Lele26g0110 1178 FunFam General transcription factor IIF subunit 2 1102 1169 - -
Lele26g0110 1178 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele26g0110 1178 MobiDBLite consensus disorder prediction 1075 1106 - -
Lele26g0110 1178 SUPERFAMILY Rap30/74 interaction domains 928 1036 IPR011039 GO:0006367
Lele26g0110 1178 MobiDBLite consensus disorder prediction 1089 1106 - -
Lele26g0110 1178 CDD TFIIF_beta 930 1035 - -
Lele26g0110 1178 MobiDBLite consensus disorder prediction 899 930 - -
Lele26g0110 1178 Coils Coil 92 126 - -
Lele26g0110 1178 Pfam TFIIF, beta subunit HTH domain 1104 1167 IPR040450 -
Lele26g0110 1178 Gene3D - 1102 1169 IPR036388 -
Lele26g0110 1178 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele26g0110 1178 SUPERFAMILY "Winged helix" DNA-binding domain 1102 1168 IPR036390 -
Lele26g0110 1178 Pfam TFIIF, beta subunit N-terminus 937 1051 IPR040504 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0110 Lele-ChrLele26 634136 649090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0110 10 817 Primary Pumps ATPases(2) AT2G21410 74.381 0.0 1247