Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0102 ATGGAAGCGTTTCATCGTGTTGGCATTGGCCTTTGCACTCCTCGATTGCGGCCACCACTGCATCTTCGAAGGTCTAATAGAAACAATTCTCATAATGGCGGCGGTTCTGTGGCAGCCACGTGCTCCGCCAGCATATGGGCCGAACGCCTCATTTCCGATTTTCAGTTCCTCGGGGACTCCTCGGACCACCACCATTCGATATCTTCATCTGTCGCTACTCTCACTCCCACTATTCCTCTCCCTCCGAGACTCGACCCTCCCGAACGCTATGTTTCCATCCCCCTTGACTTCTATCGGGTTCTTGGAGCAGAGACGCATTTCCTCGGTGACGGCATTCGAAGAGCTTACGAAGCTAGGGTCTCAAAGCCTCCTTCGTATGGGTTCAGCCACGACACGTTAATCAGCCGCAGACAAATACTTCAAGCTGCATGTGAAACCCTTGCCGATCCAGGATCAAGGAGAGAGTACAATCAGAGCCTTGTCGATGACGAGGAGGGAACCATTGTCACCCAAGTCCCCTGGGACAAGGTTCCTGGGGCTCTGTGCGTTTTGCAAGAAGCTGGAGACTCTGAGTTGACACTTCAGATTGGCGGAAGTTTGCTCAAAGAGAGGCTATCCAAATCATTTAAGCAAGATGTTATCTTGGCGATGGCCCTTGCTTACGTTGACTTGTCAAGGGACGCTATGGCGTTGTCCCCTCCTGATTTTATTGCTGGCTGTGAGTTGCTTGAGAGGGCATTGAAGCTCCTGCAGGAAGAAGGGGCCAGTGGCCTAGCTCCGGATTTACAATCTCAAATAGAAGAGACACTAGAAGATATTACCCCACGATGTGTTTTGGAACTTCTAGCCTTACCTATTCTTGATGAATATCGATCAAGGAGGGAGGAAGGTCTTCATGGTGTACGCAATATTCTGTGGGCTGTTGGAGGAGGGGGAGCAGCAGCCATTGCTGGTGGCTTCACCCGTGAAGGTTTCATGAATAAAGCCTTTTTACATATGACAGCAGCTGAGCAGGTTGATCTCTTTGTTGCCACACCAAGTAATATTCCGGCTGAAAGTTTTGAAGTGTATGGAGTGGCACTTGCATTGGTTGCACAAGCTTTTGTATGTAAAAAGCCACATCTTATCCAGGATGCAGATAACTTATTCCAACAACTTCAGCAAACTAAGGTTTCAACTGTTAAGAATGTTGCCTCTATCTATTCTCCCAAAGAGAATAGGGAGGTTGACTTTGCTTTAGAGAGGGGCCTCTGTGCATTGCTTGTGGGAGAGCTTGATAAATGTCACTCGTGGTTGGGATTAGACAGTGAAAGCTCCCCTTATAGAAACCCATCTATTATGGAATTTATTTTGGAAAACTCAAAGGACGATGATGTCAGTGAACTTCCTGGACTTTGCAAATTATTGGAGACATGGTTGACAGAGGTGGTTTTTCCCCGATTTAGAGATACTAAAGATATAAGATTCAAGCTTGGAGATTACTATGATGACCCTACAGTGCTGAGTTATCTGGAGAAGCTAGAGGGCGTAGGTCATTCACCATTGGCTGCTGCTGCTGCCATAGTGAAAATTGGAGCCGAGGCTTCTGCTGTTATTGGTCATGTGAAGACTAGTGCTATTAACACATTGCGGAAGGTATTTCCTGTTGTTACTGAAGATCAAATTGTGAAGGCTCACGATAGCAGTAAGATGGATTATTTTGTTCTTGATAAAATTGAGGATCCTCTGATAATAACAGACCAAGATAAGTATGCTAATGTGGAGGTTTCTGGCATAAAGAATTCTGGTGAAATAAGTGAAGATGAGTTTATTACTAACAAGATTAAAGAGGCAACAGTTAAGATCATGTGTGCTGGTGTTGTAATTGGACTAGGAACTTTGGTTGGCCTAAAGTACTTAACTACTAGGAATGACTCGCCCATTCTACAGAAAACAACTGGTTTGGCAATGGCCTCAGATGCTATCAATGGAGGTTCATTAGGAGATGAAAAATCTGGGGAGCAACAACCGAAAATGGATGCTAGAGTTGCAGAAGCTCTAGTTCGGAACTGGCAAAATATCAAATCCCAAGCTTTTGGACCTGATCATTGTCTGGAAAAATTGCAAGATGTTTTGGATGGTGAGATGCTGAAGATATGGACTGATCGTGCAGCGGAAATTGCACAGCTTGGTTGGTTCTATGACTATGCCTTGTTGAGCCTCAACATTGATAGTGTGACTATATCGCAGAATGGACAACGAGCAGCAGTTGAAGCGACTCTCAAAGAGTCAACCCACCTTACTGCTAGTGGTCATCCAGATCATAATGCCTCAAACATTAGAACCTACACGACGAGGTATGAGTTGTCTTGTTCAGGATCTGAGTGGAAAATTGTTGAAGGCGCAGTGCTTGAGTCATGA 2400 0.4542 MEAFHRVGIGLCTPRLRPPLHLRRSNRNNSHNGGGSVAATCSASIWAERLISDFQFLGDSSDHHHSISSSVATLTPTIPLPPRLDPPERYVSIPLDFYRVLGAETHFLGDGIRRAYEARVSKPPSYGFSHDTLISRRQILQAACETLADPGSRREYNQSLVDDEEGTIVTQVPWDKVPGALCVLQEAGDSELTLQIGGSLLKERLSKSFKQDVILAMALAYVDLSRDAMALSPPDFIAGCELLERALKLLQEEGASGLAPDLQSQIEETLEDITPRCVLELLALPILDEYRSRREEGLHGVRNILWAVGGGGAAAIAGGFTREGFMNKAFLHMTAAEQVDLFVATPSNIPAESFEVYGVALALVAQAFVCKKPHLIQDADNLFQQLQQTKVSTVKNVASIYSPKENREVDFALERGLCALLVGELDKCHSWLGLDSESSPYRNPSIMEFILENSKDDDVSELPGLCKLLETWLTEVVFPRFRDTKDIRFKLGDYYDDPTVLSYLEKLEGVGHSPLAAAAAIVKIGAEASAVIGHVKTSAINTLRKVFPVVTEDQIVKAHDSSKMDYFVLDKIEDPLIITDQDKYANVEVSGIKNSGEISEDEFITNKIKEATVKIMCAGVVIGLGTLVGLKYLTTRNDSPILQKTTGLAMASDAINGGSLGDEKSGEQQPKMDARVAEALVRNWQNIKSQAFGPDHCLEKLQDVLDGEMLKIWTDRAAEIAQLGWFYDYALLSLNIDSVTISQNGQRAAVEATLKESTHLTASGHPDHNASNIRTYTTRYELSCSGSEWKIVEGAVLES 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0102 799 Pfam ARC6-like, IMS domain 677 791 IPR025344 -
Lele26g0102 799 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 2 798 IPR044685 -
Lele26g0102 799 SUPERFAMILY Chaperone J-domain 94 163 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0102 Lele-ChrLele26 580401 584669 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0102 26 580401 584669 Lele27g1992 27 24148463 24156749 hybridization
Lele26g0102 26 580401 584669 Lele28g0101 28 574732 591071 hybridization