Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0091 ATGTTCGATGCTCTGCCGCACTGCACCCTACTTCGAAGCATTGCGTGCGTGAATATAATAGTCGGAGATAATGCTCATCAAGTAAACTCCGTAGCCGTTGAAAATTTAGGCTGTCCCGTGCTGTGTTGCTTTACCGACACAGTTGCAAATTTTGAGATGGACCGGCGCTGGCCCTGGAAGAAAAAATCATCTGACAAGGCAGTGCCTGACAAAGCAGCTGCTACACGGGACACTGTTAGTGCCTCCTCCCAGGGCAATCAGGATAACTACAAAAAACCAAACTATGTCCACATTTCTGTGGATTCATATTCACATCTGACTTGTTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACTCTAGAGGATGAGATCAAGGAGCTGAGTGATAAGCTGTCAGCGGCAAATTCAGAGATGACAACCAAGGAAAACCTTGTAAAACAACATGCAAAAGTAGCTGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGTCATTGAAGAATCATCTAGAATCTGTCACTCTTGCAAAACTCACTGCTGAGGATCGTGCATCACATCTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGATGAGAAAATACAAGAAGTTTCTCTCTCTAAAGCCAGGCAATTGGACAAGATTAAGGGGGAGCTTGAGGCAAAGATTGATAACTTAGAACAGGAACTCCTAAGGTCAGCTGCTGAAAATGGGGCGCTTTCAAAGTCCTTGCAGGAGCGCTCCAACATGCTAATAAAAATAAGTGAAGAAAAGGCTCAAGCTGAGGCTGACATTGAGCTTCTGAAGGGCAACATAGAATCATGCGAAAGAGAAATCAATTCACTTAAATATGAACTTCATCTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATTAGATCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGGGTCAAAAAAATTGCCAAATTAGAGGCAGAATGCCAAAGATTGCGTGGTCTGGTGCGGAAAAAGTTACCCGGTCCTGCAGCACTTGCACAGATGAAGCTAGAAGTTGAGAGTCTTGGCCGGGACTATGGAGAAAATCGACTACGGAAGTCTCCTGTCAAGCCTTCTAGTCCTCACATGTCTCCTCTGCCTGACTTCTTAGAGAATGCACAGAAATTCCAGAAAGAGAACGAATTTCTTGCGGAGCGTTTATTGGTAATGGAAGAAGAAACTAAGATGCTCAAAGAAGCTTTGGCTAAATGTAACTGTGAATTGCAGGCCTCAAGAAGCATGTGCGCAAAAACCTTAAGCAGGCTTCAAAGCTTGGAAGCTCAACATCAAACATGTAACCAGCAAAAAGTATCTCCAAAATCCATAGCCCGGATGACCCATGAAAGTATTTATAGTCACAATGCAAGCTATGCACCCAGTATAACCTCCATATCTGAAGATGGAAACGATGATGCATTAAGCTGTGCTGAGTCTTGGGCTACAGCATTAATCTCTGAGCTCTCACAATTTCGAAAGGAAAAGAATACTGTGAAATCAAGCAAACCTGAATCCACAAATAAGTTGGAGTTAATGGATGATTTTCTGGAGGTGGAAAAGTTGGCTCATCTATCAAACAATTCTAAAGATACCTCTGTTTCAATTTCTTCCAACAAGACATCTGAAGTTGTGACCAATGATGTAATGAATATCAATAATGGCAGAGATGATTCTTCTGATGAACAGATTGTTTCAAATCCATTGTCAAATCTGGAGTCTTCTGTTGCAGAATTGTCAGTAACTGATCCTGGAGCTGATGTTGATGGGTTTTCATTGACAGAGCTCCAATCAAGAATATTGTCAGTGTTCAAATCCATGTATAAGGATGCTGATAAAGGAAAGGTCCTGGAGGATATTAAACATATTCTGGAGGATGAACAAGACACTTCTGTCCAGCACTCTTCAGGTCGCATTACTCAGGTTGTCCAACCGCTCCAGTCTTCTGATTCTCCATGTGATAGGCATGTTAATCCTGAAGATGCTGGCTTAAGTGTTGAAAAGGATTCCACTTCATCCCGGCAAGCAACAGAATTTGTGAAGATAACTTCAAATATAGAAGCTGCAATTTCTCAGATTCACGACTTTGTATTGTTCTTAGGCAGAGATGCTATGGCAGTTAATGACACATCTTGTAATGTAGATGGAATGAGCCAAAAGATTGAGGAGTTCTCTGTTACTTTTAATAAAGTTCTACACAGTGAAGCAAGTTTGTCATTATTTGTTCTAGACCTGTCTTGTGTTTTAGCAAAAGTGAGCGAGTTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAAATAACAGTCCTGATTGCATCGACAAGATTGCCTTGCCAGAAAATAAGTTACCTCGAGATGGTTCACCTGGAGAGAGATATCAAAATGGTTGTTCTCATAATCTAAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAATCTTGTCTCGGCCTATGAATCAAATGCTACATTCAAGAAATTCTCAGTGGAGGAGTTTGAAGAGTTGAAATTAGAGAAAGAGAAGGCAGAAATGGATCTGTCAAGATGCACTGAAAGTCTTGAAACAACAAAGTCTCAGTTACTGGAAACCGAGCAACTTCTGGCGGAAGTTAAATCCCAATTGGCTTCTACTCAAAAATCTAATAGCTTGGCTGATACACAGCTGAAGTGTATGGCAGAGTCATACAGGTCACTCGAAACACGTGCCCATGAGTTAGAAACTGAGCTAAATCTTTTGCGAGTCAAGACTGAAACTCTGGAGAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGATGCTTTGGCGAATTGTAAGGAGCTAGAAGAGCAATTACAAAGGAACGAGAGTTCAGAAGCTGGTTGTGACCAAAAGACCAAGCAGGAGAGGGATTTGGCAACTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATTTATCTTCTTGGCAAGCAGTTGAAAGCTTTGCATCCTCAAACAGAGCAAAATGAATCTCCAAACGGGGAAAGAAGTCCGAAGGTTGGTGGCTTCCCGGAGGATGGACCTACAATTAGTGGCCCAAATTTGCAAGAATTAGATCAGGCCGAGTTGGAGAATGCTACTTCTGCATATATGCAGAAATTAGGCGGGGGGTCGCCTCTGCACTTATCCAACGCCGTCTACGGTCCATCAGACAATGAAGCAAACCTTCCGGACAGACCTACGGTGAGGCCTCCAAAACATAGGCCTACGAAGTCAACCTCATCATCTGCCTCCTCCACTCCTACACCAGAGAAACACGCACGAGGCTTCAGTAGATTCTTCTCATCCAAGGGAAAGAACGGTCACTGA 3411 0.4263 MFDALPHCTLLRSIACVNIIVGDNAHQVNSVAVENLGCPVLCCFTDTVANFEMDRRWPWKKKSSDKAVPDKAAATRDTVSASSQGNQDNYKKPNYVHISVDSYSHLTCLEDQVKTYEEKVQTLEDEIKELSDKLSAANSEMTTKENLVKQHAKVAEEAVSGWEKAEAEALSLKNHLESVTLAKLTAEDRASHLDGALKECMRQIRNLKEEHDEKIQEVSLSKARQLDKIKGELEAKIDNLEQELLRSAAENGALSKSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHLVSKELEIRNEEKNMSIRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGENRLRKSPVKPSSPHMSPLPDFLENAQKFQKENEFLAERLLVMEEETKMLKEALAKCNCELQASRSMCAKTLSRLQSLEAQHQTCNQQKVSPKSIARMTHESIYSHNASYAPSITSISEDGNDDALSCAESWATALISELSQFRKEKNTVKSSKPESTNKLELMDDFLEVEKLAHLSNNSKDTSVSISSNKTSEVVTNDVMNINNGRDDSSDEQIVSNPLSNLESSVAELSVTDPGADVDGFSLTELQSRILSVFKSMYKDADKGKVLEDIKHILEDEQDTSVQHSSGRITQVVQPLQSSDSPCDRHVNPEDAGLSVEKDSTSSRQATEFVKITSNIEAAISQIHDFVLFLGRDAMAVNDTSCNVDGMSQKIEEFSVTFNKVLHSEASLSLFVLDLSCVLAKVSEFRFNVLGYKGTEAENNSPDCIDKIALPENKLPRDGSPGERYQNGCSHNLNPCSDPEVPDDGNLVSAYESNATFKKFSVEEFEELKLEKEKAEMDLSRCTESLETTKSQLLETEQLLAEVKSQLASTQKSNSLADTQLKCMAESYRSLETRAHELETELNLLRVKTETLENELQDEKRGHEDALANCKELEEQLQRNESSEAGCDQKTKQERDLATAAEKLAECQETIYLLGKQLKALHPQTEQNESPNGERSPKVGGFPEDGPTISGPNLQELDQAELENATSAYMQKLGGGSPLHLSNAVYGPSDNEANLPDRPTVRPPKHRPTKSTSSSASSTPTPEKHARGFSRFFSSKGKNGH 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0091 1136 MobiDBLite consensus disorder prediction 1101 1119 - -
Lele26g0091 1136 Pfam Filament-like plant protein, long coiled-coil 144 1022 IPR008587 -
Lele26g0091 1136 SUPERFAMILY Tropomyosin 858 1025 - -
Lele26g0091 1136 Coils Coil 853 901 - -
Lele26g0091 1136 Coils Coil 400 420 - -
Lele26g0091 1136 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 53 1131 - -
Lele26g0091 1136 MobiDBLite consensus disorder prediction 1063 1136 - -
Lele26g0091 1136 Coils Coil 265 341 - -
Lele26g0091 1136 Coils Coil 190 250 - -
Lele26g0091 1136 MobiDBLite consensus disorder prediction 62 88 - -
Lele26g0091 1136 MobiDBLite consensus disorder prediction 670 694 - -
Lele26g0091 1136 Coils Coil 106 147 - -
Lele26g0091 1136 Coils Coil 985 1005 - -
Lele26g0091 1136 Coils Coil 916 978 - -
Lele26g0091 1136 MobiDBLite consensus disorder prediction 1017 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0091 Lele-ChrLele26 489035 493917 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0091 26 489035 493917 Lele01g1200 01 7178056 7182198 CCT
Lele26g0091 26 489035 493917 Lele02g1469 02 18899628 18903594 CCT
Lele26g0091 26 489035 493917 Lele03g1214 03 7145268 7149235 CCT
Lele26g0091 26 489035 493917 Lele04g1452 04 19747213 19752857 CCT
Lele26g0091 26 489035 493917 Lele27g2006 27 24243492 24248329 hybridization
Lele26g0091 26 489035 493917 Lele28g0090 28 497956 509370 hybridization