Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0065 ATGCTTAGGAGAGGGAAAAGAGATCACAGGGGGCGTGCCTCACATCATCCCAATTTGGTGGCAAGTTCACACGAAGCAGCAGGGAAAGGGGAAGCGGCACTTCTTAATCTTTTGATTGACTTTGACTGGGAACCCCCCATCTCAAGTCTCAACAACCCAATGACGTCCATTTTAGCTATTTTAATTCATAGTCTATGGGTTCCCCCCTTTTATGTGGCCGTACCGATTCGCTGCTCTCACTCTTTATTTCAGCAGCTGTTCCTATCAAAGATGGCCTTTCTTGTGCACAGACAAGTGTGCGGCTGTGTGCTTCTTGAGTTCTTTGCTATGGCCAACACTACGCCCAATCACACACAGACCGTTTCTGGATGGGCTGCTCACGATTCTTCTGGCAAAATTACCCCTTTCACTTTTAAACGACGGGAGAACGGCGCTAACGACGTCACTATACGGATCTCGTACTGTGGTATCTGCCACACTGATCTTCACTACGCTAAAAATGACTGGGGCATCACCATGTATCCCGTAGTTCCCGGGCACGAGATCGTAGGGGTGATAACGAAGGTGGGAAGCGACGTGAAGGGGTTTAAGGAAGGAGACAGAGCAGGGGTGGGGTGCCTGGCAGCCTCGTGCCTGGACTGTGAATACTGCAAGAGTGATCAGGAGAACTACTGCGAACAATTACAGTTCACATACAACGGCATCTTCTGGGACGGCAGCATCACCTACGGCGGCTACTCCGACATGATAGTGGCGGACTACAGATATGTGGTGCACATACCGGAGAACTTGAGGATGGAAGGAGCGGCGCCGCTGCTGTGTGGGGGGATAACGGTGTTCAGTCCGATGAAGGATCACGGGTTGGTGGAGAGCGGGGGAAAGAGGATAGGGGTGGTGGGGTTGGGAGGGCTGGGGCACATGGCGGTGAAATTTGGGAAGGCGTTTGGGCACCACGTGACGGTGATCAGCAGATCGGCAGGGAAGGAGTGGGAGGCAAAGCACAGACTGGGAGCTGATGAGTTCATTGTGAGCAGCGAGGTGAAGCAAATGGAGGGAGTGAGGAGGAAGTTGGATTTCATATTGGATACGGTGTCAGGGCAGCACCCTCTGCTGCCTCTCCTGGAACTACTCAAGGTCAATGGAACCCTGTTCATCGTGGGCGCCCCCAACGAGCCCTTCCAGCTGCCCGCTTTCCCTCTGATCTTCGGGAAAAGGGCGGTGAAAGGGGGAATCATAGGGGGCATCAAGGAGACGCAGGAGATGCTGCAACTTTGTGGGAAACACAACATCACTTGCGACACGGAGTTGATAAGGCCCGACCATATCAACGAGGCCATGCACCGCCTCGCCAACAATGATGTTCGTTACCGTTTTGTCATCGACATCGCTTCTGCCTCTTCCTGA 1404 0.5321 MLRRGKRDHRGRASHHPNLVASSHEAAGKGEAALLNLLIDFDWEPPISSLNNPMTSILAILIHSLWVPPFYVAVPIRCSHSLFQQLFLSKMAFLVHRQVCGCVLLEFFAMANTTPNHTQTVSGWAAHDSSGKITPFTFKRRENGANDVTIRISYCGICHTDLHYAKNDWGITMYPVVPGHEIVGVITKVGSDVKGFKEGDRAGVGCLAASCLDCEYCKSDQENYCEQLQFTYNGIFWDGSITYGGYSDMIVADYRYVVHIPENLRMEGAAPLLCGGITVFSPMKDHGLVESGGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISRSAGKEWEAKHRLGADEFIVSSEVKQMEGVRRKLDFILDTVSGQHPLLPLLELLKVNGTLFIVGAPNEPFQLPAFPLIFGKRAVKGGIIGGIKETQEMLQLCGKHNITCDTELIRPDHINEAMHRLANNDVRYRFVIDIASASS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0065 467 SMART PKS_ER_names_mod 128 460 IPR020843 GO:0016491
Lele26g0065 467 Pfam Zinc-binding dehydrogenase 303 424 IPR013149 -
Lele26g0065 467 Gene3D - 275 432 - -
Lele26g0065 467 Pfam Alcohol dehydrogenase GroES-like domain 146 259 IPR013154 -
Lele26g0065 467 FunFam probable cinnamyl alcohol dehydrogenase 124 283 - -
Lele26g0065 467 MobiDBLite consensus disorder prediction 1 24 - -
Lele26g0065 467 CDD CAD1 123 461 - -
Lele26g0065 467 FunFam Cinnamyl alcohol dehydrogenase 275 432 - -
Lele26g0065 467 PANTHER ALDEHYDE REDUCTASE 116 463 - -
Lele26g0065 467 Coils Coil 467 467 - -
Lele26g0065 467 SUPERFAMILY GroES-like 126 292 IPR011032 -
Lele26g0065 467 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 179 193 IPR002328 GO:0008270|GO:0016491
Lele26g0065 467 Gene3D - 124 462 - -
Lele26g0065 467 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 265 430 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0065 Lele-ChrLele26 343740 345991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0065 123 465 Monolignol Biosynthesis Gene Families AT2G21730 58.430 1.68e-141 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0065 26 343740 345991 Lele28g0063 28 343685 345286 hybridization